FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1625897_s_at:

>probe:Drosophila_2:1625897_s_at:60:417; Interrogation_Position=1029; Antisense; GAGCCCTGCGATGGAGACTTTTGTA
>probe:Drosophila_2:1625897_s_at:256:481; Interrogation_Position=1051; Antisense; GTATTTATGTAGTTTTTGCGTAGCC
>probe:Drosophila_2:1625897_s_at:483:721; Interrogation_Position=1066; Antisense; TTGCGTAGCCTATCAATACCTATTA
>probe:Drosophila_2:1625897_s_at:538:241; Interrogation_Position=1127; Antisense; AATACTGTTCATTGCTGTTCACAAA
>probe:Drosophila_2:1625897_s_at:237:601; Interrogation_Position=1142; Antisense; TGTTCACAAAACACCGATACGCACA
>probe:Drosophila_2:1625897_s_at:699:135; Interrogation_Position=1160; Antisense; ACGCACACATACATATCCTATATCC
>probe:Drosophila_2:1625897_s_at:579:29; Interrogation_Position=1229; Antisense; ATACACTTGTAATTGCTTCTTCAAA
>probe:Drosophila_2:1625897_s_at:31:479; Interrogation_Position=1282; Antisense; GTTTAGTGTCATATTTCCCGAGCAA
>probe:Drosophila_2:1625897_s_at:9:21; Interrogation_Position=1292; Antisense; ATATTTCCCGAGCAAATCATCGTTT
>probe:Drosophila_2:1625897_s_at:286:9; Interrogation_Position=1337; Antisense; ATTGCCAACGATTTGTAATGTTCTT
>probe:Drosophila_2:1625897_s_at:263:701; Interrogation_Position=1362; Antisense; TTTTTCTCTCTCTCGCTGAGAGCAA
>probe:Drosophila_2:1625897_s_at:74:703; Interrogation_Position=1444; Antisense; TTATATGTCTACACCTTCGACCGAC
>probe:Drosophila_2:1625897_s_at:498:155; Interrogation_Position=1488; Antisense; ACACCTCTCACACCCATTTAAATAT
>probe:Drosophila_2:1625897_s_at:679:715; Interrogation_Position=952; Antisense; TTCGTGGCCGCGAGGAGACTTCCAG

Paste this into a BLAST search page for me
GAGCCCTGCGATGGAGACTTTTGTAGTATTTATGTAGTTTTTGCGTAGCCTTGCGTAGCCTATCAATACCTATTAAATACTGTTCATTGCTGTTCACAAATGTTCACAAAACACCGATACGCACAACGCACACATACATATCCTATATCCATACACTTGTAATTGCTTCTTCAAAGTTTAGTGTCATATTTCCCGAGCAAATATTTCCCGAGCAAATCATCGTTTATTGCCAACGATTTGTAATGTTCTTTTTTTCTCTCTCTCGCTGAGAGCAATTATATGTCTACACCTTCGACCGACACACCTCTCACACCCATTTAAATATTTCGTGGCCGCGAGGAGACTTCCAG

Full Affymetrix probeset data:

Annotations for 1625897_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720