FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1625908_a_at:

>probe:Drosophila_2:1625908_a_at:108:81; Interrogation_Position=4033; Antisense; AGGTGATCCAGGAGACCGATTCCGA
>probe:Drosophila_2:1625908_a_at:573:619; Interrogation_Position=4063; Antisense; TGCTCTCCTACTACGGTCTGAAGAA
>probe:Drosophila_2:1625908_a_at:313:145; Interrogation_Position=4092; Antisense; ACTCGTGCCGATGCAGCCAAGATAA
>probe:Drosophila_2:1625908_a_at:515:117; Interrogation_Position=4186; Antisense; AGCTGGCTGTATTAGACGACTGTAT
>probe:Drosophila_2:1625908_a_at:265:455; Interrogation_Position=4229; Antisense; GATCAACGAGCTGTATACCGAGATT
>probe:Drosophila_2:1625908_a_at:700:427; Interrogation_Position=4248; Antisense; GAGATTATCAAGTTCGTGGACGCCA
>probe:Drosophila_2:1625908_a_at:494:69; Interrogation_Position=4318; Antisense; ATGGCCACTACGGTCGCATGTACAA
>probe:Drosophila_2:1625908_a_at:489:381; Interrogation_Position=4372; Antisense; GAACCCGCGATCACTTCGTGGAGCT
>probe:Drosophila_2:1625908_a_at:656:151; Interrogation_Position=4429; Antisense; ACATCCGTACTGTCATCAACCGTAT
>probe:Drosophila_2:1625908_a_at:148:483; Interrogation_Position=4450; Antisense; GTATGATGATCACTGCCTTTCCCAG
>probe:Drosophila_2:1625908_a_at:717:113; Interrogation_Position=4473; Antisense; AGCAGCTTCCGTTTGTTCTGAGCAC
>probe:Drosophila_2:1625908_a_at:505:421; Interrogation_Position=4492; Antisense; GAGCACTTTCCGACAGAATACGCAA
>probe:Drosophila_2:1625908_a_at:46:673; Interrogation_Position=4510; Antisense; TACGCAACAAATATTCACGCTTCGA
>probe:Drosophila_2:1625908_a_at:365:343; Interrogation_Position=4528; Antisense; GCTTCGAAGCGATCATTGTTTTGTA

Paste this into a BLAST search page for me
AGGTGATCCAGGAGACCGATTCCGATGCTCTCCTACTACGGTCTGAAGAAACTCGTGCCGATGCAGCCAAGATAAAGCTGGCTGTATTAGACGACTGTATGATCAACGAGCTGTATACCGAGATTGAGATTATCAAGTTCGTGGACGCCAATGGCCACTACGGTCGCATGTACAAGAACCCGCGATCACTTCGTGGAGCTACATCCGTACTGTCATCAACCGTATGTATGATGATCACTGCCTTTCCCAGAGCAGCTTCCGTTTGTTCTGAGCACGAGCACTTTCCGACAGAATACGCAATACGCAACAAATATTCACGCTTCGAGCTTCGAAGCGATCATTGTTTTGTA

Full Affymetrix probeset data:

Annotations for 1625908_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720