FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1625942_s_at:

>probe:Drosophila_2:1625942_s_at:57:467; Interrogation_Position=4196; Antisense; GATTGGCAGGCCTTTTAATTTCAGC
>probe:Drosophila_2:1625942_s_at:347:579; Interrogation_Position=4204; Antisense; GGCCTTTTAATTTCAGCTGTACATT
>probe:Drosophila_2:1625942_s_at:309:17; Interrogation_Position=4231; Antisense; ATTTTACTGCTATGACTGTCCCAAT
>probe:Drosophila_2:1625942_s_at:568:435; Interrogation_Position=4345; Antisense; GATGAAAACTCCAACTTCGCTACCT
>probe:Drosophila_2:1625942_s_at:440:699; Interrogation_Position=4396; Antisense; TTTTTGATACGCTTTTACTTCTGAA
>probe:Drosophila_2:1625942_s_at:565:17; Interrogation_Position=4475; Antisense; ATTTATCTGTATCTTGTGGTCTTTA
>probe:Drosophila_2:1625942_s_at:706:517; Interrogation_Position=4490; Antisense; GTGGTCTTTACATACTGTATTCCTA
>probe:Drosophila_2:1625942_s_at:131:629; Interrogation_Position=4510; Antisense; TCCTATTTTACTGTGGCATGTTCCA
>probe:Drosophila_2:1625942_s_at:22:471; Interrogation_Position=4529; Antisense; GTTCCAATCATTTTGCTGTGCACTT
>probe:Drosophila_2:1625942_s_at:721:621; Interrogation_Position=4542; Antisense; TGCTGTGCACTTCGTTTTCGAGGCA
>probe:Drosophila_2:1625942_s_at:722:475; Interrogation_Position=4555; Antisense; GTTTTCGAGGCACTCAGTAGAGCAG
>probe:Drosophila_2:1625942_s_at:642:183; Interrogation_Position=4660; Antisense; AAAATCCTATTTTAATCCGCGCTAT
>probe:Drosophila_2:1625942_s_at:548:655; Interrogation_Position=4672; Antisense; TAATCCGCGCTATACATAACATTGT
>probe:Drosophila_2:1625942_s_at:241:635; Interrogation_Position=4706; Antisense; TCTATTTTTCGACAATGACGGTATA

Paste this into a BLAST search page for me
GATTGGCAGGCCTTTTAATTTCAGCGGCCTTTTAATTTCAGCTGTACATTATTTTACTGCTATGACTGTCCCAATGATGAAAACTCCAACTTCGCTACCTTTTTTGATACGCTTTTACTTCTGAAATTTATCTGTATCTTGTGGTCTTTAGTGGTCTTTACATACTGTATTCCTATCCTATTTTACTGTGGCATGTTCCAGTTCCAATCATTTTGCTGTGCACTTTGCTGTGCACTTCGTTTTCGAGGCAGTTTTCGAGGCACTCAGTAGAGCAGAAAATCCTATTTTAATCCGCGCTATTAATCCGCGCTATACATAACATTGTTCTATTTTTCGACAATGACGGTATA

Full Affymetrix probeset data:

Annotations for 1625942_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720