FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1625973_a_at:

>probe:Drosophila_2:1625973_a_at:285:67; Interrogation_Position=1051; Antisense; AGTGCGAGTACTCCGTGGGACCCAA
>probe:Drosophila_2:1625973_a_at:669:227; Interrogation_Position=1074; Antisense; AATGGCGGTGACGACCGACTACTGG
>probe:Drosophila_2:1625973_a_at:655:303; Interrogation_Position=1088; Antisense; CCGACTACTGGTGGAATTTCTGCAT
>probe:Drosophila_2:1625973_a_at:661:445; Interrogation_Position=1134; Antisense; GATGAATGCGTCAAACGGCCGGTTG
>probe:Drosophila_2:1625973_a_at:169:285; Interrogation_Position=1149; Antisense; CGGCCGGTTGGTAAGTCGCTCAAAG
>probe:Drosophila_2:1625973_a_at:434:211; Interrogation_Position=1171; Antisense; AAGAGACCTGTTTAGCGGCGGCCAA
>probe:Drosophila_2:1625973_a_at:475:183; Interrogation_Position=1229; Antisense; AAAAGCGTTGCGACTCAGGTGACAT
>probe:Drosophila_2:1625973_a_at:10:269; Interrogation_Position=1244; Antisense; CAGGTGACATCGGTTCAAGGACAAA
>probe:Drosophila_2:1625973_a_at:158:559; Interrogation_Position=1262; Antisense; GGACAAATGGCTTTTCATCCTTTAG
>probe:Drosophila_2:1625973_a_at:638:359; Interrogation_Position=1286; Antisense; GCAACTATCATGTAAGGACTTTTTA
>probe:Drosophila_2:1625973_a_at:58:531; Interrogation_Position=1348; Antisense; GGGATATGATACTCATCCTTGCATA
>probe:Drosophila_2:1625973_a_at:256:313; Interrogation_Position=1402; Antisense; GCCAGAAATCGACTTTACATGAATT
>probe:Drosophila_2:1625973_a_at:406:657; Interrogation_Position=1458; Antisense; TTCGGTTGCCATAGTAACAGTCGGA
>probe:Drosophila_2:1625973_a_at:437:477; Interrogation_Position=1579; Antisense; GTTTTACACTGCATTTTTACGAAAT

Paste this into a BLAST search page for me
AGTGCGAGTACTCCGTGGGACCCAAAATGGCGGTGACGACCGACTACTGGCCGACTACTGGTGGAATTTCTGCATGATGAATGCGTCAAACGGCCGGTTGCGGCCGGTTGGTAAGTCGCTCAAAGAAGAGACCTGTTTAGCGGCGGCCAAAAAAGCGTTGCGACTCAGGTGACATCAGGTGACATCGGTTCAAGGACAAAGGACAAATGGCTTTTCATCCTTTAGGCAACTATCATGTAAGGACTTTTTAGGGATATGATACTCATCCTTGCATAGCCAGAAATCGACTTTACATGAATTTTCGGTTGCCATAGTAACAGTCGGAGTTTTACACTGCATTTTTACGAAAT

Full Affymetrix probeset data:

Annotations for 1625973_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720