FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1625987_at:

>probe:Drosophila_2:1625987_at:246:503; Interrogation_Position=1003; Antisense; GTCCTATAATCCCAAGCTTTTCAAC
>probe:Drosophila_2:1625987_at:149:711; Interrogation_Position=1064; Antisense; TTCAGGTTGGAATCCCGGAGGTCCG
>probe:Drosophila_2:1625987_at:322:621; Interrogation_Position=1122; Antisense; TGCGGGTGTGTCTCGTGGAATCCAC
>probe:Drosophila_2:1625987_at:266:365; Interrogation_Position=1139; Antisense; GAATCCACCAGGTTGGAATCCCGGC
>probe:Drosophila_2:1625987_at:180:555; Interrogation_Position=1188; Antisense; GGACCTTGCAGACCAGGACCTGTCA
>probe:Drosophila_2:1625987_at:414:555; Interrogation_Position=1203; Antisense; GGACCTGTCATTCCCAACAATGCAG
>probe:Drosophila_2:1625987_at:166:51; Interrogation_Position=1229; Antisense; ATGCGGATTCGATCCACAATGCCCA
>probe:Drosophila_2:1625987_at:657:45; Interrogation_Position=1247; Antisense; ATGCCCACAAGGCTGGAATCCCGAT
>probe:Drosophila_2:1625987_at:413:585; Interrogation_Position=1260; Antisense; TGGAATCCCGATAGTCCTCTATTAC
>probe:Drosophila_2:1625987_at:165:597; Interrogation_Position=1322; Antisense; TGTCATTCCCCGCAGTGGAGAAAAT
>probe:Drosophila_2:1625987_at:470:107; Interrogation_Position=1340; Antisense; AGAAAATGGATGTGGCTGCTCCTGC
>probe:Drosophila_2:1625987_at:26:653; Interrogation_Position=845; Antisense; TCAAGGGACTGAGCCACCAAGCACT
>probe:Drosophila_2:1625987_at:296:203; Interrogation_Position=955; Antisense; AACCATGCGGATGTAGTAGCTCTCA
>probe:Drosophila_2:1625987_at:596:675; Interrogation_Position=971; Antisense; TAGCTCTCACCCGTCTGGATGGAAT

Paste this into a BLAST search page for me
GTCCTATAATCCCAAGCTTTTCAACTTCAGGTTGGAATCCCGGAGGTCCGTGCGGGTGTGTCTCGTGGAATCCACGAATCCACCAGGTTGGAATCCCGGCGGACCTTGCAGACCAGGACCTGTCAGGACCTGTCATTCCCAACAATGCAGATGCGGATTCGATCCACAATGCCCAATGCCCACAAGGCTGGAATCCCGATTGGAATCCCGATAGTCCTCTATTACTGTCATTCCCCGCAGTGGAGAAAATAGAAAATGGATGTGGCTGCTCCTGCTCAAGGGACTGAGCCACCAAGCACTAACCATGCGGATGTAGTAGCTCTCATAGCTCTCACCCGTCTGGATGGAAT

Full Affymetrix probeset data:

Annotations for 1625987_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720