FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1625988_a_at:

>probe:Drosophila_2:1625988_a_at:145:229; Interrogation_Position=10417; Antisense; AATGGCATGCAACACTCCAGTTCCA
>probe:Drosophila_2:1625988_a_at:72:95; Interrogation_Position=10435; Antisense; AGTTCCAGCATGACGGGTCTTTCTG
>probe:Drosophila_2:1625988_a_at:278:577; Interrogation_Position=10530; Antisense; GGCGCGCATGCAAATCCTGGAGGAT
>probe:Drosophila_2:1625988_a_at:358:549; Interrogation_Position=10548; Antisense; GGAGGATCACAATCGGCAACTGGAA
>probe:Drosophila_2:1625988_a_at:385:563; Interrogation_Position=10569; Antisense; GGAAGCTCAGTTGCAGCGACTACGC
>probe:Drosophila_2:1625988_a_at:304:191; Interrogation_Position=10595; Antisense; AACTTCTCGATGAACCCAATGGCGG
>probe:Drosophila_2:1625988_a_at:106:611; Interrogation_Position=10706; Antisense; TGACCGCCTCGCAATTGAACACGGA
>probe:Drosophila_2:1625988_a_at:253:613; Interrogation_Position=10721; Antisense; TGAACACGGACTCACCGGCAAAGAT
>probe:Drosophila_2:1625988_a_at:631:379; Interrogation_Position=10746; Antisense; GAACCAACAGAACGGCCACTACGAG
>probe:Drosophila_2:1625988_a_at:376:193; Interrogation_Position=10783; Antisense; AACTCAAGTGGCCTAGTGACCGTAA
>probe:Drosophila_2:1625988_a_at:660:443; Interrogation_Position=10837; Antisense; GATGATCTGGAGGACTCGTCGAGCA
>probe:Drosophila_2:1625988_a_at:296:421; Interrogation_Position=10857; Antisense; GAGCAGCAACACTACGAACACCACG
>probe:Drosophila_2:1625988_a_at:20:415; Interrogation_Position=10893; Antisense; GACCACGGCAACCACGGAGAAAACT
>probe:Drosophila_2:1625988_a_at:145:187; Interrogation_Position=10937; Antisense; AACACCTTCGATACTTAATTGCATG

Paste this into a BLAST search page for me
AATGGCATGCAACACTCCAGTTCCAAGTTCCAGCATGACGGGTCTTTCTGGGCGCGCATGCAAATCCTGGAGGATGGAGGATCACAATCGGCAACTGGAAGGAAGCTCAGTTGCAGCGACTACGCAACTTCTCGATGAACCCAATGGCGGTGACCGCCTCGCAATTGAACACGGATGAACACGGACTCACCGGCAAAGATGAACCAACAGAACGGCCACTACGAGAACTCAAGTGGCCTAGTGACCGTAAGATGATCTGGAGGACTCGTCGAGCAGAGCAGCAACACTACGAACACCACGGACCACGGCAACCACGGAGAAAACTAACACCTTCGATACTTAATTGCATG

Full Affymetrix probeset data:

Annotations for 1625988_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720