FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1626056_a_at:

>probe:Drosophila_2:1626056_a_at:572:711; Interrogation_Position=3012; Antisense; TTCATCCAGGTCGATGGCACGGACT
>probe:Drosophila_2:1626056_a_at:485:583; Interrogation_Position=3026; Antisense; TGGCACGGACTACTTCAGCGAGGAA
>probe:Drosophila_2:1626056_a_at:232:325; Interrogation_Position=3043; Antisense; GCGAGGAAAGCTACCCGGCCAGCTG
>probe:Drosophila_2:1626056_a_at:48:361; Interrogation_Position=3121; Antisense; GCAAGCTGCTGCGAGTCGTCCAGTG
>probe:Drosophila_2:1626056_a_at:170:87; Interrogation_Position=3142; Antisense; AGTGCCACACGGTGCTCGGTCAAGA
>probe:Drosophila_2:1626056_a_at:542:81; Interrogation_Position=3174; Antisense; AGGGAGTGCATTGCCTTCAGTACGC
>probe:Drosophila_2:1626056_a_at:663:335; Interrogation_Position=3222; Antisense; GCACGCCAGTTCACCGGGTTGGATA
>probe:Drosophila_2:1626056_a_at:646:529; Interrogation_Position=3237; Antisense; GGGTTGGATAACTTCCTCACCTACG
>probe:Drosophila_2:1626056_a_at:165:543; Interrogation_Position=3319; Antisense; GGATTGCTTCGAAACCTGTAATAGT
>probe:Drosophila_2:1626056_a_at:499:327; Interrogation_Position=3356; Antisense; GCGATTATGTTACTAGCGGCACGAA
>probe:Drosophila_2:1626056_a_at:555:103; Interrogation_Position=3380; Antisense; AGACGCGCAATTTAACATGTTTACA
>probe:Drosophila_2:1626056_a_at:623:23; Interrogation_Position=3416; Antisense; ATATGCCTGTTTTTACGCAATGAAC
>probe:Drosophila_2:1626056_a_at:728:259; Interrogation_Position=3440; Antisense; CACGATATTTTCTTCGAGTCGCATT
>probe:Drosophila_2:1626056_a_at:44:689; Interrogation_Position=3486; Antisense; TATTGTTTATCTTACGTGTCGGGTT

Paste this into a BLAST search page for me
TTCATCCAGGTCGATGGCACGGACTTGGCACGGACTACTTCAGCGAGGAAGCGAGGAAAGCTACCCGGCCAGCTGGCAAGCTGCTGCGAGTCGTCCAGTGAGTGCCACACGGTGCTCGGTCAAGAAGGGAGTGCATTGCCTTCAGTACGCGCACGCCAGTTCACCGGGTTGGATAGGGTTGGATAACTTCCTCACCTACGGGATTGCTTCGAAACCTGTAATAGTGCGATTATGTTACTAGCGGCACGAAAGACGCGCAATTTAACATGTTTACAATATGCCTGTTTTTACGCAATGAACCACGATATTTTCTTCGAGTCGCATTTATTGTTTATCTTACGTGTCGGGTT

Full Affymetrix probeset data:

Annotations for 1626056_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720