FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1626142_at:

>probe:Drosophila_2:1626142_at:459:631; Interrogation_Position=116; Antisense; TCCGATGTCGGACCTGTAAGCTTTA
>probe:Drosophila_2:1626142_at:496:499; Interrogation_Position=122; Antisense; GTCGGACCTGTAAGCTTTAACTATG
>probe:Drosophila_2:1626142_at:40:717; Interrogation_Position=13; Antisense; TTCGAGATCAGCACATAAGCCAAAA
>probe:Drosophila_2:1626142_at:470:707; Interrogation_Position=138; Antisense; TTAACTATGGCTACGAGACCAGCGA
>probe:Drosophila_2:1626142_at:237:671; Interrogation_Position=149; Antisense; TACGAGACCAGCGATGGATCCTCTG
>probe:Drosophila_2:1626142_at:35:123; Interrogation_Position=158; Antisense; AGCGATGGATCCTCTGCTCAGGCCG
>probe:Drosophila_2:1626142_at:524:317; Interrogation_Position=182; Antisense; GCCGGACAGCTGAAGAACGTTGGAA
>probe:Drosophila_2:1626142_at:427:193; Interrogation_Position=197; Antisense; AACGTTGGAACTGATGAGGAGGCTC
>probe:Drosophila_2:1626142_at:296:437; Interrogation_Position=212; Antisense; GAGGAGGCTCTCAACGTCAAGGGTA
>probe:Drosophila_2:1626142_at:134:339; Interrogation_Position=218; Antisense; GCTCTCAACGTCAAGGGTACCTATT
>probe:Drosophila_2:1626142_at:703:673; Interrogation_Position=235; Antisense; TACCTATTCCTTTGTGGCCGATGAT
>probe:Drosophila_2:1626142_at:280:305; Interrogation_Position=336; Antisense; CCGTGGTTTGAGCTATCCATCGTTA
>probe:Drosophila_2:1626142_at:141:419; Interrogation_Position=345; Antisense; GAGCTATCCATCGTTAATATTGTTT
>probe:Drosophila_2:1626142_at:723:333; Interrogation_Position=83; Antisense; GCTGTCGCCGATGTTCAGATTCTGA

Paste this into a BLAST search page for me
TCCGATGTCGGACCTGTAAGCTTTAGTCGGACCTGTAAGCTTTAACTATGTTCGAGATCAGCACATAAGCCAAAATTAACTATGGCTACGAGACCAGCGATACGAGACCAGCGATGGATCCTCTGAGCGATGGATCCTCTGCTCAGGCCGGCCGGACAGCTGAAGAACGTTGGAAAACGTTGGAACTGATGAGGAGGCTCGAGGAGGCTCTCAACGTCAAGGGTAGCTCTCAACGTCAAGGGTACCTATTTACCTATTCCTTTGTGGCCGATGATCCGTGGTTTGAGCTATCCATCGTTAGAGCTATCCATCGTTAATATTGTTTGCTGTCGCCGATGTTCAGATTCTGA

Full Affymetrix probeset data:

Annotations for 1626142_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720