FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1626143_a_at:

>probe:Drosophila_2:1626143_a_at:280:623; Interrogation_Position=3413; Antisense; TGCGTTGATCGTACGCTTCACGAGA
>probe:Drosophila_2:1626143_a_at:38:295; Interrogation_Position=3464; Antisense; CGAGCAGCGTCTTCGCCTGGAAAAG
>probe:Drosophila_2:1626143_a_at:523:323; Interrogation_Position=3495; Antisense; GCGCTGGCCGCTTCCAAGAAAGAGA
>probe:Drosophila_2:1626143_a_at:312:423; Interrogation_Position=3516; Antisense; GAGAACGATCAGGTGCTTATGCGCA
>probe:Drosophila_2:1626143_a_at:329:199; Interrogation_Position=3579; Antisense; AACGAGCTGAAGAGCAAGGCGCACT
>probe:Drosophila_2:1626143_a_at:418:639; Interrogation_Position=3603; Antisense; TCGGTGCGCGAGAAAAAGCTGCTGC
>probe:Drosophila_2:1626143_a_at:117:515; Interrogation_Position=3639; Antisense; GTGTACAACGGAGCCCTGGAGGACA
>probe:Drosophila_2:1626143_a_at:223:47; Interrogation_Position=3663; Antisense; ATCCTGCTCGGCCTGAAGAGCGAGC
>probe:Drosophila_2:1626143_a_at:347:635; Interrogation_Position=3717; Antisense; TCGCAGCGCCGGAGGATCGACAATA
>probe:Drosophila_2:1626143_a_at:329:397; Interrogation_Position=3735; Antisense; GACAATAATCGTTTATCGCGCACCC
>probe:Drosophila_2:1626143_a_at:56:479; Interrogation_Position=3745; Antisense; GTTTATCGCGCACCCTGGAGGAAAT
>probe:Drosophila_2:1626143_a_at:191:425; Interrogation_Position=3796; Antisense; GAGATCGACGCAATGACGACGACGG
>probe:Drosophila_2:1626143_a_at:624:295; Interrogation_Position=3922; Antisense; CGAGACACTCTTACACATACACAAA
>probe:Drosophila_2:1626143_a_at:397:13; Interrogation_Position=3946; Antisense; ATTCACATTCCCTTTTATGCAAATC

Paste this into a BLAST search page for me
TGCGTTGATCGTACGCTTCACGAGACGAGCAGCGTCTTCGCCTGGAAAAGGCGCTGGCCGCTTCCAAGAAAGAGAGAGAACGATCAGGTGCTTATGCGCAAACGAGCTGAAGAGCAAGGCGCACTTCGGTGCGCGAGAAAAAGCTGCTGCGTGTACAACGGAGCCCTGGAGGACAATCCTGCTCGGCCTGAAGAGCGAGCTCGCAGCGCCGGAGGATCGACAATAGACAATAATCGTTTATCGCGCACCCGTTTATCGCGCACCCTGGAGGAAATGAGATCGACGCAATGACGACGACGGCGAGACACTCTTACACATACACAAAATTCACATTCCCTTTTATGCAAATC

Full Affymetrix probeset data:

Annotations for 1626143_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720