FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1626182_a_at:

>probe:Drosophila_2:1626182_a_at:314:421; Interrogation_Position=1796; Antisense; GAGCACAGTCACTTTTCGCAGTATG
>probe:Drosophila_2:1626182_a_at:609:561; Interrogation_Position=1820; Antisense; GGAACTTTCCTGTGCGATTCAGAGC
>probe:Drosophila_2:1626182_a_at:671:369; Interrogation_Position=1861; Antisense; GAATGTGCACACCAGGACGACGAGC
>probe:Drosophila_2:1626182_a_at:248:135; Interrogation_Position=1877; Antisense; ACGACGAGCCTGTGGTCTTATTTGA
>probe:Drosophila_2:1626182_a_at:520:497; Interrogation_Position=1891; Antisense; GTCTTATTTGAACCGGCCTGATGTC
>probe:Drosophila_2:1626182_a_at:295:297; Interrogation_Position=1935; Antisense; CGCTGTACGAGCCTAATGCCAATGT
>probe:Drosophila_2:1626182_a_at:389:531; Interrogation_Position=1972; Antisense; GGTGGCGCCCATAAGCTTAGAGCTG
>probe:Drosophila_2:1626182_a_at:51:85; Interrogation_Position=2000; Antisense; AGTGATCTCTATTTGCGGTGGGTGA
>probe:Drosophila_2:1626182_a_at:151:339; Interrogation_Position=2037; Antisense; GCTCAGTCACAGTCATGTCGCAAAT
>probe:Drosophila_2:1626182_a_at:164:163; Interrogation_Position=2058; Antisense; AAATTCAGGAACTTGTCACCCGCGA
>probe:Drosophila_2:1626182_a_at:396:203; Interrogation_Position=2121; Antisense; AAGCCATGGAGCTCGGCCAGGAAGT
>probe:Drosophila_2:1626182_a_at:367:563; Interrogation_Position=2140; Antisense; GGAAGTGTCCAACCTCATGAAAAGT
>probe:Drosophila_2:1626182_a_at:577:23; Interrogation_Position=2176; Antisense; ATAGTCGGCTACCTCAAATGTTCTC
>probe:Drosophila_2:1626182_a_at:242:473; Interrogation_Position=2195; Antisense; GTTCTCTATCTTTTAATCTCCTGCA

Paste this into a BLAST search page for me
GAGCACAGTCACTTTTCGCAGTATGGGAACTTTCCTGTGCGATTCAGAGCGAATGTGCACACCAGGACGACGAGCACGACGAGCCTGTGGTCTTATTTGAGTCTTATTTGAACCGGCCTGATGTCCGCTGTACGAGCCTAATGCCAATGTGGTGGCGCCCATAAGCTTAGAGCTGAGTGATCTCTATTTGCGGTGGGTGAGCTCAGTCACAGTCATGTCGCAAATAAATTCAGGAACTTGTCACCCGCGAAAGCCATGGAGCTCGGCCAGGAAGTGGAAGTGTCCAACCTCATGAAAAGTATAGTCGGCTACCTCAAATGTTCTCGTTCTCTATCTTTTAATCTCCTGCA

Full Affymetrix probeset data:

Annotations for 1626182_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720