FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1626219_s_at:

>probe:Drosophila_2:1626219_s_at:642:333; Interrogation_Position=2952; Antisense; GCTGATATATGTCTTGATACTCCTT
>probe:Drosophila_2:1626219_s_at:465:603; Interrogation_Position=2966; Antisense; TGATACTCCTTTATGCAATGGGCAT
>probe:Drosophila_2:1626219_s_at:132:255; Interrogation_Position=2992; Antisense; CAACATCTATGGACGTTTTGTGGAC
>probe:Drosophila_2:1626219_s_at:212:133; Interrogation_Position=3021; Antisense; ACCCCTGTCGTAACTTTGCCAGGAG
>probe:Drosophila_2:1626219_s_at:526:719; Interrogation_Position=3036; Antisense; TTGCCAGGAGAGACGTTAGCCTCAC
>probe:Drosophila_2:1626219_s_at:84:121; Interrogation_Position=3076; Antisense; AGCTGGCTACCCTTGGATGTCCAGA
>probe:Drosophila_2:1626219_s_at:63:549; Interrogation_Position=3090; Antisense; GGATGTCCAGAGTTAATAGCGCGTA
>probe:Drosophila_2:1626219_s_at:718:163; Interrogation_Position=3131; Antisense; AAATATTGCTATACGCCTGGGAACA
>probe:Drosophila_2:1626219_s_at:231:561; Interrogation_Position=3193; Antisense; GGAAAGCCCGCGTAGAGAGTCCTCT
>probe:Drosophila_2:1626219_s_at:215:101; Interrogation_Position=3208; Antisense; AGAGTCCTCTCTTTGATTGCTCACA
>probe:Drosophila_2:1626219_s_at:360:7; Interrogation_Position=3223; Antisense; ATTGCTCACAGTATGCCAAAGGATT
>probe:Drosophila_2:1626219_s_at:686:225; Interrogation_Position=3285; Antisense; AATGGAGAACTTCCGGACCACATTT
>probe:Drosophila_2:1626219_s_at:143:719; Interrogation_Position=3295; Antisense; TTCCGGACCACATTTCAGCAGTATA
>probe:Drosophila_2:1626219_s_at:186:111; Interrogation_Position=3448; Antisense; AGCAAAACTGCATACCCTATTTCGT

Paste this into a BLAST search page for me
GCTGATATATGTCTTGATACTCCTTTGATACTCCTTTATGCAATGGGCATCAACATCTATGGACGTTTTGTGGACACCCCTGTCGTAACTTTGCCAGGAGTTGCCAGGAGAGACGTTAGCCTCACAGCTGGCTACCCTTGGATGTCCAGAGGATGTCCAGAGTTAATAGCGCGTAAAATATTGCTATACGCCTGGGAACAGGAAAGCCCGCGTAGAGAGTCCTCTAGAGTCCTCTCTTTGATTGCTCACAATTGCTCACAGTATGCCAAAGGATTAATGGAGAACTTCCGGACCACATTTTTCCGGACCACATTTCAGCAGTATAAGCAAAACTGCATACCCTATTTCGT

Full Affymetrix probeset data:

Annotations for 1626219_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720