FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1626261_s_at:

>probe:Drosophila_2:1626261_s_at:647:39; Interrogation_Position=1267; Antisense; ATCGGTTCACACCTTATTTGATTGT
>probe:Drosophila_2:1626261_s_at:169:11; Interrogation_Position=1308; Antisense; ATTCATTCCTTTATTCCTTCAGTCT
>probe:Drosophila_2:1626261_s_at:442:7; Interrogation_Position=1320; Antisense; ATTCCTTCAGTCTATCCACATGTAT
>probe:Drosophila_2:1626261_s_at:500:481; Interrogation_Position=1421; Antisense; GTATCGTATCCGTAATTTTCGCCGC
>probe:Drosophila_2:1626261_s_at:475:15; Interrogation_Position=1435; Antisense; ATTTTCGCCGCCAAGGATCAGTTTA
>probe:Drosophila_2:1626261_s_at:657:33; Interrogation_Position=1451; Antisense; ATCAGTTTACGTTCAGCATCACAGC
>probe:Drosophila_2:1626261_s_at:476:469; Interrogation_Position=1476; Antisense; GTTGCTGATTCTTGTCGCCGACAAA
>probe:Drosophila_2:1626261_s_at:250:503; Interrogation_Position=1489; Antisense; GTCGCCGACAAATTGCCTGAGGTTT
>probe:Drosophila_2:1626261_s_at:475:607; Interrogation_Position=1506; Antisense; TGAGGTTTTGCTTGCACCGACGCAG
>probe:Drosophila_2:1626261_s_at:147:295; Interrogation_Position=1523; Antisense; CGACGCAGCATCCAGTATTTCATTT
>probe:Drosophila_2:1626261_s_at:186:363; Interrogation_Position=1549; Antisense; GAATAGCCCCTAAATGTCGTTTATC
>probe:Drosophila_2:1626261_s_at:192:327; Interrogation_Position=1705; Antisense; GCGAGACTAATTTATGCCTCTGTAT
>probe:Drosophila_2:1626261_s_at:391:677; Interrogation_Position=1732; Antisense; TAGTTTGTCATTTGTGCAACCCTCC
>probe:Drosophila_2:1626261_s_at:602:281; Interrogation_Position=1756; Antisense; CTGTTGTTCGCAGGCCCAACGAAAA

Paste this into a BLAST search page for me
ATCGGTTCACACCTTATTTGATTGTATTCATTCCTTTATTCCTTCAGTCTATTCCTTCAGTCTATCCACATGTATGTATCGTATCCGTAATTTTCGCCGCATTTTCGCCGCCAAGGATCAGTTTAATCAGTTTACGTTCAGCATCACAGCGTTGCTGATTCTTGTCGCCGACAAAGTCGCCGACAAATTGCCTGAGGTTTTGAGGTTTTGCTTGCACCGACGCAGCGACGCAGCATCCAGTATTTCATTTGAATAGCCCCTAAATGTCGTTTATCGCGAGACTAATTTATGCCTCTGTATTAGTTTGTCATTTGTGCAACCCTCCCTGTTGTTCGCAGGCCCAACGAAAA

Full Affymetrix probeset data:

Annotations for 1626261_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720