Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1626332_s_at:

>probe:Drosophila_2:1626332_s_at:216:15; Interrogation_Position=2755; Antisense; ATTATTTGTTCCATTCCGTCACTGA
>probe:Drosophila_2:1626332_s_at:595:571; Interrogation_Position=2794; Antisense; GGCTAGATCACGCACACATTGTACA
>probe:Drosophila_2:1626332_s_at:170:599; Interrogation_Position=2813; Antisense; TGTACAATGCCTCAACAAGCTGGAT
>probe:Drosophila_2:1626332_s_at:258:161; Interrogation_Position=2827; Antisense; ACAAGCTGGATGCTGGCTCCATAGA
>probe:Drosophila_2:1626332_s_at:712:25; Interrogation_Position=2847; Antisense; ATAGAGCGCGTGCAACTGATGTCCC
>probe:Drosophila_2:1626332_s_at:286:605; Interrogation_Position=2863; Antisense; TGATGTCCCGCGACGAGCAATCGGT
>probe:Drosophila_2:1626332_s_at:648:109; Interrogation_Position=2878; Antisense; AGCAATCGGTACTCATCGTCTCCTA
>probe:Drosophila_2:1626332_s_at:146:43; Interrogation_Position=2892; Antisense; ATCGTCTCCTATGCTGAACTCAAGA
>probe:Drosophila_2:1626332_s_at:514:209; Interrogation_Position=2913; Antisense; AAGAATTGTCTGGAGAACGCCTTCT
>probe:Drosophila_2:1626332_s_at:686:421; Interrogation_Position=2925; Antisense; GAGAACGCCTTCTCCGAACTGATGT
>probe:Drosophila_2:1626332_s_at:625:383; Interrogation_Position=2940; Antisense; GAACTGATGTCAAGTGCGGCCAACT
>probe:Drosophila_2:1626332_s_at:235:577; Interrogation_Position=2957; Antisense; GGCCAACTGAGCAACCCGAGGGTAA
>probe:Drosophila_2:1626332_s_at:440:105; Interrogation_Position=2991; Antisense; AGAAAACACGCGCAGCTCACTTAGC
>probe:Drosophila_2:1626332_s_at:589:457; Interrogation_Position=3183; Antisense; GATATCCAATGTTATGTTAGCTCTT

Paste this into a BLAST search page for me
ATTATTTGTTCCATTCCGTCACTGAGGCTAGATCACGCACACATTGTACATGTACAATGCCTCAACAAGCTGGATACAAGCTGGATGCTGGCTCCATAGAATAGAGCGCGTGCAACTGATGTCCCTGATGTCCCGCGACGAGCAATCGGTAGCAATCGGTACTCATCGTCTCCTAATCGTCTCCTATGCTGAACTCAAGAAAGAATTGTCTGGAGAACGCCTTCTGAGAACGCCTTCTCCGAACTGATGTGAACTGATGTCAAGTGCGGCCAACTGGCCAACTGAGCAACCCGAGGGTAAAGAAAACACGCGCAGCTCACTTAGCGATATCCAATGTTATGTTAGCTCTT

Full Affymetrix probeset data:

Annotations for 1626332_s_at in Drosophila_2.na32.annot.csv


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime