FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1626396_s_at:

>probe:Drosophila_2:1626396_s_at:209:721; Interrogation_Position=1430; Antisense; TTCCACCAGTGGTCATCAATGGCAA
>probe:Drosophila_2:1626396_s_at:571:65; Interrogation_Position=1448; Antisense; ATGGCAAAAGATATCGCCCCGCTCA
>probe:Drosophila_2:1626396_s_at:199:187; Interrogation_Position=1477; Antisense; AACAACTGTCTGACTTTTCCGGGCA
>probe:Drosophila_2:1626396_s_at:184:217; Interrogation_Position=1525; Antisense; AAGGCCCGGTATCTGCCAAACGAAG
>probe:Drosophila_2:1626396_s_at:613:217; Interrogation_Position=1547; Antisense; AAGTATTTTCCGTTGTGTCGCACGA
>probe:Drosophila_2:1626396_s_at:549:501; Interrogation_Position=1563; Antisense; GTCGCACGAGCTGGCCAGGAATACA
>probe:Drosophila_2:1626396_s_at:299:561; Interrogation_Position=1580; Antisense; GGAATACACCGCAGGAACTACTTGA
>probe:Drosophila_2:1626396_s_at:728:147; Interrogation_Position=1599; Antisense; ACTTGACGAAGGCACTCTGTTTCCG
>probe:Drosophila_2:1626396_s_at:435:695; Interrogation_Position=1618; Antisense; TTTCCGCCCATCAAGGATGCACATA
>probe:Drosophila_2:1626396_s_at:477:63; Interrogation_Position=1643; Antisense; ATGTGGCCTTCAATGTGGGCGTTGC
>probe:Drosophila_2:1626396_s_at:576:575; Interrogation_Position=1660; Antisense; GGCGTTGCCATGACTCAGTATCTAA
>probe:Drosophila_2:1626396_s_at:638:167; Interrogation_Position=1784; Antisense; AAATGTTTACCCAAAGCCCGATGAT
>probe:Drosophila_2:1626396_s_at:641:395; Interrogation_Position=1852; Antisense; GAAATTCCCTGCCAACTACGTGGGA
>probe:Drosophila_2:1626396_s_at:55:147; Interrogation_Position=1953; Antisense; ACTTGGCCGGGATACCTTTATATCG

Paste this into a BLAST search page for me
TTCCACCAGTGGTCATCAATGGCAAATGGCAAAAGATATCGCCCCGCTCAAACAACTGTCTGACTTTTCCGGGCAAAGGCCCGGTATCTGCCAAACGAAGAAGTATTTTCCGTTGTGTCGCACGAGTCGCACGAGCTGGCCAGGAATACAGGAATACACCGCAGGAACTACTTGAACTTGACGAAGGCACTCTGTTTCCGTTTCCGCCCATCAAGGATGCACATAATGTGGCCTTCAATGTGGGCGTTGCGGCGTTGCCATGACTCAGTATCTAAAAATGTTTACCCAAAGCCCGATGATGAAATTCCCTGCCAACTACGTGGGAACTTGGCCGGGATACCTTTATATCG

Full Affymetrix probeset data:

Annotations for 1626396_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720