FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1626465_a_at:

>probe:Drosophila_2:1626465_a_at:359:567; Interrogation_Position=4384; Antisense; GGCACCAGGTTGTCCGGAGCCGAAC
>probe:Drosophila_2:1626465_a_at:223:367; Interrogation_Position=4412; Antisense; GAATCGGCGATCGTCGGACGTGTTC
>probe:Drosophila_2:1626465_a_at:48:141; Interrogation_Position=4429; Antisense; ACGTGTTCGGCCAGCGGATCGTATT
>probe:Drosophila_2:1626465_a_at:24:331; Interrogation_Position=4442; Antisense; GCGGATCGTATTCCAGCTTGTATAC
>probe:Drosophila_2:1626465_a_at:453:569; Interrogation_Position=4503; Antisense; GGCATCGGGTACATCGACGACCAGA
>probe:Drosophila_2:1626465_a_at:128:129; Interrogation_Position=4522; Antisense; ACCAGAGCTGGATATCCGTGGACAT
>probe:Drosophila_2:1626465_a_at:81:665; Interrogation_Position=4581; Antisense; TATACGTTTAAGTGCTTGAGCCTCA
>probe:Drosophila_2:1626465_a_at:45:727; Interrogation_Position=4596; Antisense; TTGAGCCTCAGCGATTCATCTGTAT
>probe:Drosophila_2:1626465_a_at:132:13; Interrogation_Position=4609; Antisense; ATTCATCTGTATCCGCATCTGCTAG
>probe:Drosophila_2:1626465_a_at:160:37; Interrogation_Position=4625; Antisense; ATCTGCTAGACACTTCGTTTCGTTG
>probe:Drosophila_2:1626465_a_at:499:469; Interrogation_Position=4646; Antisense; GTTGCGCAGCTCCAATTGTACATAG
>probe:Drosophila_2:1626465_a_at:676:611; Interrogation_Position=4722; Antisense; TGAAAGCAATTCTGTTCGCCCAACA
>probe:Drosophila_2:1626465_a_at:547:685; Interrogation_Position=4787; Antisense; TATCTCTGTATCTGTATCTCCTTCA
>probe:Drosophila_2:1626465_a_at:597:39; Interrogation_Position=4802; Antisense; ATCTCCTTCAATGGTAACTCTGTAA

Paste this into a BLAST search page for me
GGCACCAGGTTGTCCGGAGCCGAACGAATCGGCGATCGTCGGACGTGTTCACGTGTTCGGCCAGCGGATCGTATTGCGGATCGTATTCCAGCTTGTATACGGCATCGGGTACATCGACGACCAGAACCAGAGCTGGATATCCGTGGACATTATACGTTTAAGTGCTTGAGCCTCATTGAGCCTCAGCGATTCATCTGTATATTCATCTGTATCCGCATCTGCTAGATCTGCTAGACACTTCGTTTCGTTGGTTGCGCAGCTCCAATTGTACATAGTGAAAGCAATTCTGTTCGCCCAACATATCTCTGTATCTGTATCTCCTTCAATCTCCTTCAATGGTAACTCTGTAA

Full Affymetrix probeset data:

Annotations for 1626465_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720