FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1626488_s_at:

>probe:Drosophila_2:1626488_s_at:256:41; Interrogation_Position=1003; Antisense; ATCTGGTCCAAGATTCCCGATTTGG
>probe:Drosophila_2:1626488_s_at:181:321; Interrogation_Position=1030; Antisense; GCCCAGGAGGTCAAGTTGCGCCAGA
>probe:Drosophila_2:1626488_s_at:661:549; Interrogation_Position=1077; Antisense; GGAGATGACCTTCAAGCGCTCAGCC
>probe:Drosophila_2:1626488_s_at:332:371; Interrogation_Position=1179; Antisense; GAAGGCTCTGGCTTTGGATCTCGTC
>probe:Drosophila_2:1626488_s_at:570:201; Interrogation_Position=1267; Antisense; AACCGCAGCCAGATTGTCGGCATGG
>probe:Drosophila_2:1626488_s_at:50:265; Interrogation_Position=1293; Antisense; CAGCACTCTGGACACATGGATGGGC
>probe:Drosophila_2:1626488_s_at:725:547; Interrogation_Position=1310; Antisense; GGATGGGCGCCATCACGAACATGGA
>probe:Drosophila_2:1626488_s_at:276:441; Interrogation_Position=1341; Antisense; GATGGAGAATCGTGCCGCCGAAATC
>probe:Drosophila_2:1626488_s_at:256:311; Interrogation_Position=1357; Antisense; GCCGAAATCCTCACCAATTAGTTTT
>probe:Drosophila_2:1626488_s_at:687:703; Interrogation_Position=1380; Antisense; TTAGTTTCGCCTGATCTAGACGATC
>probe:Drosophila_2:1626488_s_at:268:677; Interrogation_Position=1396; Antisense; TAGACGATCCCACATATTCACATTT
>probe:Drosophila_2:1626488_s_at:486:25; Interrogation_Position=880; Antisense; ATAGGCGAATTGCTGGCTCATCCCA
>probe:Drosophila_2:1626488_s_at:687:647; Interrogation_Position=897; Antisense; TCATCCCATTCTTGAGTCGCTTAAG
>probe:Drosophila_2:1626488_s_at:232:57; Interrogation_Position=932; Antisense; ATGAGTGGCTCATGGAACTTCTTAA

Paste this into a BLAST search page for me
ATCTGGTCCAAGATTCCCGATTTGGGCCCAGGAGGTCAAGTTGCGCCAGAGGAGATGACCTTCAAGCGCTCAGCCGAAGGCTCTGGCTTTGGATCTCGTCAACCGCAGCCAGATTGTCGGCATGGCAGCACTCTGGACACATGGATGGGCGGATGGGCGCCATCACGAACATGGAGATGGAGAATCGTGCCGCCGAAATCGCCGAAATCCTCACCAATTAGTTTTTTAGTTTCGCCTGATCTAGACGATCTAGACGATCCCACATATTCACATTTATAGGCGAATTGCTGGCTCATCCCATCATCCCATTCTTGAGTCGCTTAAGATGAGTGGCTCATGGAACTTCTTAA

Full Affymetrix probeset data:

Annotations for 1626488_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720