FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1626523_a_at:

>probe:Drosophila_2:1626523_a_at:216:411; Interrogation_Position=4839; Antisense; GACCTGAAGGCCCAACAACTGGTGG
>probe:Drosophila_2:1626523_a_at:594:597; Interrogation_Position=4880; Antisense; TGTCGAAAAGATCACCATACCGCTG
>probe:Drosophila_2:1626523_a_at:278:203; Interrogation_Position=4940; Antisense; AACCATTCACGAGAGCATGCTTAAT
>probe:Drosophila_2:1626523_a_at:258:511; Interrogation_Position=5001; Antisense; GTGACCAACTGGACGGACTTCTGTG
>probe:Drosophila_2:1626523_a_at:586:289; Interrogation_Position=5014; Antisense; CGGACTTCTGTGGTTTCCTAGAGCA
>probe:Drosophila_2:1626523_a_at:197:261; Interrogation_Position=5037; Antisense; CAGAAAAACATCCTTTTGGCTCCCT
>probe:Drosophila_2:1626523_a_at:250:729; Interrogation_Position=5052; Antisense; TTGGCTCCCTTCTGCGGCGAGATAA
>probe:Drosophila_2:1626523_a_at:654:553; Interrogation_Position=5130; Antisense; GGAGCTCCTGCCATGGGTGCCAAGT
>probe:Drosophila_2:1626523_a_at:408:65; Interrogation_Position=5142; Antisense; ATGGGTGCCAAGTCGCTGTGTATAC
>probe:Drosophila_2:1626523_a_at:439:593; Interrogation_Position=5158; Antisense; TGTGTATACCCTTCGATCAACCAGC
>probe:Drosophila_2:1626523_a_at:619:673; Interrogation_Position=5195; Antisense; TAGCGATAAGTGCATCAACCCCAGC
>probe:Drosophila_2:1626523_a_at:288:217; Interrogation_Position=5235; Antisense; AAGTTCTACACGCTCTTCGGACGAA
>probe:Drosophila_2:1626523_a_at:608:313; Interrogation_Position=5289; Antisense; GCCAGGCTTCGTTGTTTCTCTAAAA
>probe:Drosophila_2:1626523_a_at:93:547; Interrogation_Position=5345; Antisense; GGATCGATTGACCTATATGTACTCT

Paste this into a BLAST search page for me
GACCTGAAGGCCCAACAACTGGTGGTGTCGAAAAGATCACCATACCGCTGAACCATTCACGAGAGCATGCTTAATGTGACCAACTGGACGGACTTCTGTGCGGACTTCTGTGGTTTCCTAGAGCACAGAAAAACATCCTTTTGGCTCCCTTTGGCTCCCTTCTGCGGCGAGATAAGGAGCTCCTGCCATGGGTGCCAAGTATGGGTGCCAAGTCGCTGTGTATACTGTGTATACCCTTCGATCAACCAGCTAGCGATAAGTGCATCAACCCCAGCAAGTTCTACACGCTCTTCGGACGAAGCCAGGCTTCGTTGTTTCTCTAAAAGGATCGATTGACCTATATGTACTCT

Full Affymetrix probeset data:

Annotations for 1626523_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720