FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1626579_at:

>probe:Drosophila_2:1626579_at:401:673; Interrogation_Position=1001; Antisense; TACCCCAGCCTTTATTTATCCGAGT
>probe:Drosophila_2:1626579_at:317:249; Interrogation_Position=526; Antisense; CAATATGCTGACAAGGCTGCCCAAA
>probe:Drosophila_2:1626579_at:708:579; Interrogation_Position=555; Antisense; TGGCCAATTGCACGCACCTGAAGAC
>probe:Drosophila_2:1626579_at:548:377; Interrogation_Position=634; Antisense; GAAGCAGCTGGATGTCCTGGACCTG
>probe:Drosophila_2:1626579_at:458:561; Interrogation_Position=663; Antisense; GGAACAAGATCACCGATGTGCCCGC
>probe:Drosophila_2:1626579_at:543:405; Interrogation_Position=699; Antisense; GACTGTTTGTGACCGAACTGAACCT
>probe:Drosophila_2:1626579_at:613:379; Interrogation_Position=730; Antisense; GAACCAAATATCCTCGCTGGCGGAG
>probe:Drosophila_2:1626579_at:707:437; Interrogation_Position=752; Antisense; GAGGAAGTAGCCGATTGTCCCAAGC
>probe:Drosophila_2:1626579_at:384:211; Interrogation_Position=779; Antisense; AAGACACTGCGGCTCGAGGAGAACT
>probe:Drosophila_2:1626579_at:83:697; Interrogation_Position=821; Antisense; TTTACACCCAAGATCCTCAAGGACT
>probe:Drosophila_2:1626579_at:7:401; Interrogation_Position=842; Antisense; GACTCGAAAATCTGCAACCTGGCCG
>probe:Drosophila_2:1626579_at:603:407; Interrogation_Position=869; Antisense; GACGGCAATCTGTTCAACTCGAAAC
>probe:Drosophila_2:1626579_at:302:189; Interrogation_Position=891; Antisense; AACAGTTCACCGATCTCGATGGCTA
>probe:Drosophila_2:1626579_at:139:665; Interrogation_Position=923; Antisense; TACATGGAGCGGTATACGGCGGTCA

Paste this into a BLAST search page for me
TACCCCAGCCTTTATTTATCCGAGTCAATATGCTGACAAGGCTGCCCAAATGGCCAATTGCACGCACCTGAAGACGAAGCAGCTGGATGTCCTGGACCTGGGAACAAGATCACCGATGTGCCCGCGACTGTTTGTGACCGAACTGAACCTGAACCAAATATCCTCGCTGGCGGAGGAGGAAGTAGCCGATTGTCCCAAGCAAGACACTGCGGCTCGAGGAGAACTTTTACACCCAAGATCCTCAAGGACTGACTCGAAAATCTGCAACCTGGCCGGACGGCAATCTGTTCAACTCGAAACAACAGTTCACCGATCTCGATGGCTATACATGGAGCGGTATACGGCGGTCA

Full Affymetrix probeset data:

Annotations for 1626579_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720