FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1626590_a_at:

>probe:Drosophila_2:1626590_a_at:234:291; Interrogation_Position=2465; Antisense; CGTTTGAGCATAACCGGATCCGGAT
>probe:Drosophila_2:1626590_a_at:583:449; Interrogation_Position=2481; Antisense; GATCCGGATCATCGAGCTCGGTGCA
>probe:Drosophila_2:1626590_a_at:555:633; Interrogation_Position=2530; Antisense; TCCCGCAAAGTCTTCATCATCAGAG
>probe:Drosophila_2:1626590_a_at:514:271; Interrogation_Position=2544; Antisense; CATCATCAGAGTTGTGTGCCACGAC
>probe:Drosophila_2:1626590_a_at:719:39; Interrogation_Position=2629; Antisense; ATCTGAGGCTTCGTTGGATGCCGTT
>probe:Drosophila_2:1626590_a_at:362:375; Interrogation_Position=2662; Antisense; GAAGAAATCTACATCAAACGCCGGG
>probe:Drosophila_2:1626590_a_at:106:165; Interrogation_Position=2711; Antisense; AAATCACGTACACGGATTCGCACGC
>probe:Drosophila_2:1626590_a_at:721:551; Interrogation_Position=2758; Antisense; GGAGCAGATCAACGTCATCCGCAAG
>probe:Drosophila_2:1626590_a_at:511:465; Interrogation_Position=2830; Antisense; GATTGTAACCGTTGTATAGCCAGTT
>probe:Drosophila_2:1626590_a_at:168:27; Interrogation_Position=2845; Antisense; ATAGCCAGTTTTGCAACTCCACTAA
>probe:Drosophila_2:1626590_a_at:278:651; Interrogation_Position=2915; Antisense; TCACAACTCGTTAATGGTCCCATAT
>probe:Drosophila_2:1626590_a_at:525:253; Interrogation_Position=2961; Antisense; CAACACTCGGTAGATTGGTAGCGCA
>probe:Drosophila_2:1626590_a_at:360:491; Interrogation_Position=2986; Antisense; GTAACTCATTTGTAAAGCCTCCCGC
>probe:Drosophila_2:1626590_a_at:216:175; Interrogation_Position=2999; Antisense; AAAGCCTCCCGCACAGTTGAATAAA

Paste this into a BLAST search page for me
CGTTTGAGCATAACCGGATCCGGATGATCCGGATCATCGAGCTCGGTGCATCCCGCAAAGTCTTCATCATCAGAGCATCATCAGAGTTGTGTGCCACGACATCTGAGGCTTCGTTGGATGCCGTTGAAGAAATCTACATCAAACGCCGGGAAATCACGTACACGGATTCGCACGCGGAGCAGATCAACGTCATCCGCAAGGATTGTAACCGTTGTATAGCCAGTTATAGCCAGTTTTGCAACTCCACTAATCACAACTCGTTAATGGTCCCATATCAACACTCGGTAGATTGGTAGCGCAGTAACTCATTTGTAAAGCCTCCCGCAAAGCCTCCCGCACAGTTGAATAAA

Full Affymetrix probeset data:

Annotations for 1626590_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720