FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1626639_a_at:

>probe:Drosophila_2:1626639_a_at:464:575; Interrogation_Position=1327; Antisense; GGCGAGATCTTCCTGATGCGACCCC
>probe:Drosophila_2:1626639_a_at:270:607; Interrogation_Position=1340; Antisense; TGATGCGACCCCTCGAGGACATTGC
>probe:Drosophila_2:1626639_a_at:322:437; Interrogation_Position=1354; Antisense; GAGGACATTGCCTTCATCACGCATG
>probe:Drosophila_2:1626639_a_at:149:9; Interrogation_Position=1360; Antisense; ATTGCCTTCATCACGCATGTGGGTG
>probe:Drosophila_2:1626639_a_at:149:647; Interrogation_Position=1367; Antisense; TCATCACGCATGTGGGTGATCCGGT
>probe:Drosophila_2:1626639_a_at:382:531; Interrogation_Position=1381; Antisense; GGTGATCCGGTGCTGCTCACCGTAA
>probe:Drosophila_2:1626639_a_at:30:509; Interrogation_Position=1390; Antisense; GTGCTGCTCACCGTAATTGCGGAAG
>probe:Drosophila_2:1626639_a_at:668:337; Interrogation_Position=1395; Antisense; GCTCACCGTAATTGCGGAAGAGGTT
>probe:Drosophila_2:1626639_a_at:249:591; Interrogation_Position=1424; Antisense; TGGGTCGTGACGAGCCGCCCGCACT
>probe:Drosophila_2:1626639_a_at:4:579; Interrogation_Position=1448; Antisense; TGGCCTCCACGGTCCAATTGGCGTT
>probe:Drosophila_2:1626639_a_at:448:259; Interrogation_Position=1455; Antisense; CACGGTCCAATTGGCGTTCTTTCTG
>probe:Drosophila_2:1626639_a_at:77:249; Interrogation_Position=1463; Antisense; AATTGGCGTTCTTTCTGCCCGATCG
>probe:Drosophila_2:1626639_a_at:406:247; Interrogation_Position=1492; Antisense; AATTCGCCGCCGTACTTCGAGAACG
>probe:Drosophila_2:1626639_a_at:65:299; Interrogation_Position=1499; Antisense; CGCCGTACTTCGAGAACGATCAGTA

Paste this into a BLAST search page for me
GGCGAGATCTTCCTGATGCGACCCCTGATGCGACCCCTCGAGGACATTGCGAGGACATTGCCTTCATCACGCATGATTGCCTTCATCACGCATGTGGGTGTCATCACGCATGTGGGTGATCCGGTGGTGATCCGGTGCTGCTCACCGTAAGTGCTGCTCACCGTAATTGCGGAAGGCTCACCGTAATTGCGGAAGAGGTTTGGGTCGTGACGAGCCGCCCGCACTTGGCCTCCACGGTCCAATTGGCGTTCACGGTCCAATTGGCGTTCTTTCTGAATTGGCGTTCTTTCTGCCCGATCGAATTCGCCGCCGTACTTCGAGAACGCGCCGTACTTCGAGAACGATCAGTA

Full Affymetrix probeset data:

Annotations for 1626639_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720