FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1626657_a_at:

>probe:Drosophila_2:1626657_a_at:209:395; Interrogation_Position=2036; Antisense; GAAATCTCGCGGGTGTCCAATTTTT
>probe:Drosophila_2:1626657_a_at:125:53; Interrogation_Position=2105; Antisense; ATGCTGCGCTGCTTGCATGGCGAGA
>probe:Drosophila_2:1626657_a_at:204:575; Interrogation_Position=2184; Antisense; GGCGGAGCGTGTTCAAGACATTCAA
>probe:Drosophila_2:1626657_a_at:610:121; Interrogation_Position=2216; Antisense; AGCGGTAGTTGCACACTGCAGCGAT
>probe:Drosophila_2:1626657_a_at:315:367; Interrogation_Position=2242; Antisense; GAATCGCTACGAGTACGAGCTGCTG
>probe:Drosophila_2:1626657_a_at:551:119; Interrogation_Position=2259; Antisense; AGCTGCTGGTCAAGGTGGGCACCAA
>probe:Drosophila_2:1626657_a_at:21:355; Interrogation_Position=2277; Antisense; GCACCAAGAGGAGTGGCCGTCTACT
>probe:Drosophila_2:1626657_a_at:377:127; Interrogation_Position=2312; Antisense; ACCACCACAGATGTTATCCTACGAG
>probe:Drosophila_2:1626657_a_at:39:671; Interrogation_Position=2331; Antisense; TACGAGCTCACCATGACTTTGGGAA
>probe:Drosophila_2:1626657_a_at:284:687; Interrogation_Position=2348; Antisense; TTTGGGAACTTCACACGGCTCCTAA
>probe:Drosophila_2:1626657_a_at:629:325; Interrogation_Position=2373; Antisense; GCGAGGGCGATGTTGTACTATTCTA
>probe:Drosophila_2:1626657_a_at:421:65; Interrogation_Position=2397; Antisense; ATGGAATCCTGCACAATTCTCGGCT
>probe:Drosophila_2:1626657_a_at:85:247; Interrogation_Position=2411; Antisense; AATTCTCGGCTTTTGGCTGACAACG
>probe:Drosophila_2:1626657_a_at:682:53; Interrogation_Position=2532; Antisense; ATGCACGCCTCCAAGATTTGATGAG

Paste this into a BLAST search page for me
GAAATCTCGCGGGTGTCCAATTTTTATGCTGCGCTGCTTGCATGGCGAGAGGCGGAGCGTGTTCAAGACATTCAAAGCGGTAGTTGCACACTGCAGCGATGAATCGCTACGAGTACGAGCTGCTGAGCTGCTGGTCAAGGTGGGCACCAAGCACCAAGAGGAGTGGCCGTCTACTACCACCACAGATGTTATCCTACGAGTACGAGCTCACCATGACTTTGGGAATTTGGGAACTTCACACGGCTCCTAAGCGAGGGCGATGTTGTACTATTCTAATGGAATCCTGCACAATTCTCGGCTAATTCTCGGCTTTTGGCTGACAACGATGCACGCCTCCAAGATTTGATGAG

Full Affymetrix probeset data:

Annotations for 1626657_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720