FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1626663_s_at:

>probe:Drosophila_2:1626663_s_at:132:19; Interrogation_Position=1298; Antisense; ATTTGATACGAACGCGTCGTCGCTT
>probe:Drosophila_2:1626663_s_at:96:135; Interrogation_Position=1309; Antisense; ACGCGTCGTCGCTTAACAGATAGAG
>probe:Drosophila_2:1626663_s_at:411:3; Interrogation_Position=1356; Antisense; ATTGTACCCACGATAATTTTGCTGA
>probe:Drosophila_2:1626663_s_at:508:333; Interrogation_Position=1376; Antisense; GCTGATGTTGCCGATGTGTGTGAAC
>probe:Drosophila_2:1626663_s_at:284:517; Interrogation_Position=1391; Antisense; GTGTGTGAACCATCAACCATTTCAT
>probe:Drosophila_2:1626663_s_at:418:655; Interrogation_Position=1466; Antisense; TAATGGAAAGCCAGCCTACCCTTTT
>probe:Drosophila_2:1626663_s_at:661:383; Interrogation_Position=1505; Antisense; GAAAGGTTCACAGACTCGTAACTAA
>probe:Drosophila_2:1626663_s_at:81:369; Interrogation_Position=1539; Antisense; GAATGCTCAGCTTGCAAATTTACTT
>probe:Drosophila_2:1626663_s_at:685:461; Interrogation_Position=1571; Antisense; GATTAGCTCTTTGTATCACATGGTT
>probe:Drosophila_2:1626663_s_at:497:491; Interrogation_Position=1645; Antisense; GTAAAACTTTTCACTAGCTGACTTT
>probe:Drosophila_2:1626663_s_at:450:117; Interrogation_Position=1660; Antisense; AGCTGACTTTTGTCGTTTTGAGTGT
>probe:Drosophila_2:1626663_s_at:577:485; Interrogation_Position=1690; Antisense; GTAGTGGATCACAAGAGCCGAACCA
>probe:Drosophila_2:1626663_s_at:317:539; Interrogation_Position=1717; Antisense; GGTATTTTGTACTTTCGATTTCTAT
>probe:Drosophila_2:1626663_s_at:659:81; Interrogation_Position=1784; Antisense; AGTGATTTTTGCTCTCAATTTTTTA

Paste this into a BLAST search page for me
ATTTGATACGAACGCGTCGTCGCTTACGCGTCGTCGCTTAACAGATAGAGATTGTACCCACGATAATTTTGCTGAGCTGATGTTGCCGATGTGTGTGAACGTGTGTGAACCATCAACCATTTCATTAATGGAAAGCCAGCCTACCCTTTTGAAAGGTTCACAGACTCGTAACTAAGAATGCTCAGCTTGCAAATTTACTTGATTAGCTCTTTGTATCACATGGTTGTAAAACTTTTCACTAGCTGACTTTAGCTGACTTTTGTCGTTTTGAGTGTGTAGTGGATCACAAGAGCCGAACCAGGTATTTTGTACTTTCGATTTCTATAGTGATTTTTGCTCTCAATTTTTTA

Full Affymetrix probeset data:

Annotations for 1626663_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720