FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1626749_a_at:

>probe:Drosophila_2:1626749_a_at:94:475; Interrogation_Position=2402; Antisense; GTTAAGCCGTCATTTGGCAAAATTA
>probe:Drosophila_2:1626749_a_at:136:473; Interrogation_Position=2454; Antisense; GTTAAGTAGCACCACAAAAGACAAT
>probe:Drosophila_2:1626749_a_at:588:29; Interrogation_Position=2520; Antisense; ATACACCTACATTACGTGCTTTAAA
>probe:Drosophila_2:1626749_a_at:677:237; Interrogation_Position=2547; Antisense; AATCTATCTATACCTCAATGCAAAA
>probe:Drosophila_2:1626749_a_at:709:441; Interrogation_Position=2583; Antisense; GATGTTGCTAATAAGCTTTTGCTAT
>probe:Drosophila_2:1626749_a_at:553:385; Interrogation_Position=2646; Antisense; GAACAGATATCCACACCGATGCTTG
>probe:Drosophila_2:1626749_a_at:177:131; Interrogation_Position=2660; Antisense; ACCGATGCTTGTGTAACTTGTGCAG
>probe:Drosophila_2:1626749_a_at:720:149; Interrogation_Position=2675; Antisense; ACTTGTGCAGAAACACTCTATTGTA
>probe:Drosophila_2:1626749_a_at:485:375; Interrogation_Position=2705; Antisense; GAAGACATCCTATTTAACTGTTGTA
>probe:Drosophila_2:1626749_a_at:693:37; Interrogation_Position=2731; Antisense; ATCTAATTTGCTGCGTCTTTGTACA
>probe:Drosophila_2:1626749_a_at:9:337; Interrogation_Position=2740; Antisense; GCTGCGTCTTTGTACAATTTGAAAA
>probe:Drosophila_2:1626749_a_at:229:359; Interrogation_Position=2823; Antisense; GAATCAATTGTATCGACTTAAGGGT
>probe:Drosophila_2:1626749_a_at:662:171; Interrogation_Position=2862; Antisense; AAAGAAGTCGCTTACACCTATCCAA
>probe:Drosophila_2:1626749_a_at:45:343; Interrogation_Position=2871; Antisense; GCTTACACCTATCCAACTCTAAGAA

Paste this into a BLAST search page for me
GTTAAGCCGTCATTTGGCAAAATTAGTTAAGTAGCACCACAAAAGACAATATACACCTACATTACGTGCTTTAAAAATCTATCTATACCTCAATGCAAAAGATGTTGCTAATAAGCTTTTGCTATGAACAGATATCCACACCGATGCTTGACCGATGCTTGTGTAACTTGTGCAGACTTGTGCAGAAACACTCTATTGTAGAAGACATCCTATTTAACTGTTGTAATCTAATTTGCTGCGTCTTTGTACAGCTGCGTCTTTGTACAATTTGAAAAGAATCAATTGTATCGACTTAAGGGTAAAGAAGTCGCTTACACCTATCCAAGCTTACACCTATCCAACTCTAAGAA

Full Affymetrix probeset data:

Annotations for 1626749_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720