FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1626790_s_at:

>probe:Drosophila_2:1626790_s_at:523:485; Interrogation_Position=4122; Antisense; GTAGTCTACAGCGAGGGATGAGCCT
>probe:Drosophila_2:1626790_s_at:353:57; Interrogation_Position=4139; Antisense; ATGAGCCTTGGCTTGGACACAACCA
>probe:Drosophila_2:1626790_s_at:250:583; Interrogation_Position=4147; Antisense; TGGCTTGGACACAACCAGGTCGACA
>probe:Drosophila_2:1626790_s_at:582:159; Interrogation_Position=4171; Antisense; AAACGAACCGTTGCGAATTGTTGAG
>probe:Drosophila_2:1626790_s_at:240:7; Interrogation_Position=4187; Antisense; ATTGTTGAGGAGACCCTGGGCAGCC
>probe:Drosophila_2:1626790_s_at:173:567; Interrogation_Position=4205; Antisense; GGCAGCCCGGGTGAACATATGTACT
>probe:Drosophila_2:1626790_s_at:54:25; Interrogation_Position=4221; Antisense; ATATGTACTGCAATACGTCCGCCTT
>probe:Drosophila_2:1626790_s_at:687:141; Interrogation_Position=4248; Antisense; ACGGCCACGCGTAATTCTAAAGCTT
>probe:Drosophila_2:1626790_s_at:135:483; Interrogation_Position=4349; Antisense; GTATATCCCACGAACTATTCAGCGG
>probe:Drosophila_2:1626790_s_at:314:401; Interrogation_Position=4373; Antisense; GATAATTCGCTTATTTACGTACGGA
>probe:Drosophila_2:1626790_s_at:263:117; Interrogation_Position=4406; Antisense; AGCTTTGAACATACTTACTCACTAA
>probe:Drosophila_2:1626790_s_at:358:345; Interrogation_Position=4462; Antisense; GCATTCTCACATCGTCATGTAGTCA
>probe:Drosophila_2:1626790_s_at:79:399; Interrogation_Position=4506; Antisense; GACACGTTTTTGATTGAAGATGGCT
>probe:Drosophila_2:1626790_s_at:70:471; Interrogation_Position=4633; Antisense; GTTTACCATTATAGGCTTTACTCGA

Paste this into a BLAST search page for me
GTAGTCTACAGCGAGGGATGAGCCTATGAGCCTTGGCTTGGACACAACCATGGCTTGGACACAACCAGGTCGACAAAACGAACCGTTGCGAATTGTTGAGATTGTTGAGGAGACCCTGGGCAGCCGGCAGCCCGGGTGAACATATGTACTATATGTACTGCAATACGTCCGCCTTACGGCCACGCGTAATTCTAAAGCTTGTATATCCCACGAACTATTCAGCGGGATAATTCGCTTATTTACGTACGGAAGCTTTGAACATACTTACTCACTAAGCATTCTCACATCGTCATGTAGTCAGACACGTTTTTGATTGAAGATGGCTGTTTACCATTATAGGCTTTACTCGA

Full Affymetrix probeset data:

Annotations for 1626790_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720