FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1626798_a_at:

>probe:Drosophila_2:1626798_a_at:649:191; Interrogation_Position=4320; Antisense; AACTATTTACACGAGCTACAGGCAT
>probe:Drosophila_2:1626798_a_at:685:151; Interrogation_Position=4337; Antisense; ACAGGCATATATACTCGATTGGACA
>probe:Drosophila_2:1626798_a_at:669:373; Interrogation_Position=4370; Antisense; GAAGTACCCACGTAGTATATGTTCG
>probe:Drosophila_2:1626798_a_at:124:681; Interrogation_Position=4387; Antisense; TATGTTCGTGCAATGTTGACCTTAC
>probe:Drosophila_2:1626798_a_at:538:467; Interrogation_Position=4401; Antisense; GTTGACCTTACTAATTGACTACTGA
>probe:Drosophila_2:1626798_a_at:110:727; Interrogation_Position=4473; Antisense; TTGTTATGCGTCTGAGTAGGCGAGC
>probe:Drosophila_2:1626798_a_at:702:483; Interrogation_Position=4488; Antisense; GTAGGCGAGCACGTTTATCAATGTT
>probe:Drosophila_2:1626798_a_at:583:249; Interrogation_Position=4506; Antisense; CAATGTTTATCACGTGCCCAATCAA
>probe:Drosophila_2:1626798_a_at:325:507; Interrogation_Position=4519; Antisense; GTGCCCAATCAAATGCATCGGAATT
>probe:Drosophila_2:1626798_a_at:256:249; Interrogation_Position=4702; Antisense; CAATATTGCTTTTGCGAACGCGACT
>probe:Drosophila_2:1626798_a_at:11:325; Interrogation_Position=4715; Antisense; GCGAACGCGACTTTTTGTTATATCT
>probe:Drosophila_2:1626798_a_at:190:603; Interrogation_Position=4730; Antisense; TGTTATATCTTCATTCGTCCCAATA
>probe:Drosophila_2:1626798_a_at:28:291; Interrogation_Position=4745; Antisense; CGTCCCAATAACTCACTCGATTTAT
>probe:Drosophila_2:1626798_a_at:292:179; Interrogation_Position=4784; Antisense; AAACTCAACCTCAATCACACGATAT

Paste this into a BLAST search page for me
AACTATTTACACGAGCTACAGGCATACAGGCATATATACTCGATTGGACAGAAGTACCCACGTAGTATATGTTCGTATGTTCGTGCAATGTTGACCTTACGTTGACCTTACTAATTGACTACTGATTGTTATGCGTCTGAGTAGGCGAGCGTAGGCGAGCACGTTTATCAATGTTCAATGTTTATCACGTGCCCAATCAAGTGCCCAATCAAATGCATCGGAATTCAATATTGCTTTTGCGAACGCGACTGCGAACGCGACTTTTTGTTATATCTTGTTATATCTTCATTCGTCCCAATACGTCCCAATAACTCACTCGATTTATAAACTCAACCTCAATCACACGATAT

Full Affymetrix probeset data:

Annotations for 1626798_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720