FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1626799_a_at:

>probe:Drosophila_2:1626799_a_at:183:155; Interrogation_Position=1623; Antisense; ACAGAAATTCCAGAACAGTTCAAGG
>probe:Drosophila_2:1626799_a_at:224:711; Interrogation_Position=1641; Antisense; TTCAAGGTGATCATTCCCCTGGTCA
>probe:Drosophila_2:1626799_a_at:624:137; Interrogation_Position=1835; Antisense; ACGAGAGAGCTCGTTGGCTTTTTGG
>probe:Drosophila_2:1626799_a_at:380:465; Interrogation_Position=1847; Antisense; GTTGGCTTTTTGGTGTTTGCAGAGA
>probe:Drosophila_2:1626799_a_at:536:25; Interrogation_Position=1965; Antisense; ATAGAAGAACTCCAAACTCCGCACA
>probe:Drosophila_2:1626799_a_at:100:193; Interrogation_Position=1979; Antisense; AACTCCGCACAGCTACCGAATGAAG
>probe:Drosophila_2:1626799_a_at:286:327; Interrogation_Position=2003; Antisense; GCGAGTTGAAATTTATTGCCTGGCA
>probe:Drosophila_2:1626799_a_at:312:9; Interrogation_Position=2017; Antisense; ATTGCCTGGCATCGTGCACTTGCAT
>probe:Drosophila_2:1626799_a_at:711:355; Interrogation_Position=2032; Antisense; GCACTTGCATAGTAGTCGTTACATA
>probe:Drosophila_2:1626799_a_at:279:151; Interrogation_Position=2092; Antisense; ACATAGGGATATGCGCACGTGTGTA
>probe:Drosophila_2:1626799_a_at:112:625; Interrogation_Position=2103; Antisense; TGCGCACGTGTGTATATGATATACT
>probe:Drosophila_2:1626799_a_at:326:93; Interrogation_Position=2150; Antisense; AGTTCAGATCTGTGTCTGTGTCCGT
>probe:Drosophila_2:1626799_a_at:423:513; Interrogation_Position=2167; Antisense; GTGTCCGTTGCAAAAGCATCGCCGC
>probe:Drosophila_2:1626799_a_at:521:45; Interrogation_Position=2184; Antisense; ATCGCCGCCTACAAAAAGTGCTTAT

Paste this into a BLAST search page for me
ACAGAAATTCCAGAACAGTTCAAGGTTCAAGGTGATCATTCCCCTGGTCAACGAGAGAGCTCGTTGGCTTTTTGGGTTGGCTTTTTGGTGTTTGCAGAGAATAGAAGAACTCCAAACTCCGCACAAACTCCGCACAGCTACCGAATGAAGGCGAGTTGAAATTTATTGCCTGGCAATTGCCTGGCATCGTGCACTTGCATGCACTTGCATAGTAGTCGTTACATAACATAGGGATATGCGCACGTGTGTATGCGCACGTGTGTATATGATATACTAGTTCAGATCTGTGTCTGTGTCCGTGTGTCCGTTGCAAAAGCATCGCCGCATCGCCGCCTACAAAAAGTGCTTAT

Full Affymetrix probeset data:

Annotations for 1626799_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720