FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1626808_s_at:

>probe:Drosophila_2:1626808_s_at:222:387; Interrogation_Position=1001; Antisense; GAACAACCAGAACATCGGATACACG
>probe:Drosophila_2:1626808_s_at:455:639; Interrogation_Position=1015; Antisense; TCGGATACACGAAGCTGCACCACCA
>probe:Drosophila_2:1626808_s_at:572:417; Interrogation_Position=1073; Antisense; GAGCTTGAGCTAGAAGATCAGCGGA
>probe:Drosophila_2:1626808_s_at:257:371; Interrogation_Position=1122; Antisense; GAAGGCAGCACCAAGTAGAATGTCA
>probe:Drosophila_2:1626808_s_at:318:331; Interrogation_Position=1150; Antisense; GCGGATTTGATTTTATATACAGTCT
>probe:Drosophila_2:1626808_s_at:436:721; Interrogation_Position=645; Antisense; TTGCGAAATGATCCCAACACAATTC
>probe:Drosophila_2:1626808_s_at:201:167; Interrogation_Position=682; Antisense; AAATGAAGCAGGAGCCGGTGAAGCC
>probe:Drosophila_2:1626808_s_at:675:299; Interrogation_Position=717; Antisense; CGCGCCATGGCCGAGAAGATTAATG
>probe:Drosophila_2:1626808_s_at:537:93; Interrogation_Position=733; Antisense; AGATTAATGCCTTTGCCTATTTGGA
>probe:Drosophila_2:1626808_s_at:438:305; Interrogation_Position=748; Antisense; CCTATTTGGAGTGTTCGGCTAAGTC
>probe:Drosophila_2:1626808_s_at:206:291; Interrogation_Position=786; Antisense; CGAGATGTTTTCGAGACGGCAACTA
>probe:Drosophila_2:1626808_s_at:315:679; Interrogation_Position=809; Antisense; TAGGGCCGCGCTGCAAGTCAAAAAG
>probe:Drosophila_2:1626808_s_at:572:563; Interrogation_Position=835; Antisense; GGAAGAAGACCAGATGCCTTTTGCT
>probe:Drosophila_2:1626808_s_at:674:257; Interrogation_Position=938; Antisense; CACACATACACACCTTTTACAACAA

Paste this into a BLAST search page for me
GAACAACCAGAACATCGGATACACGTCGGATACACGAAGCTGCACCACCAGAGCTTGAGCTAGAAGATCAGCGGAGAAGGCAGCACCAAGTAGAATGTCAGCGGATTTGATTTTATATACAGTCTTTGCGAAATGATCCCAACACAATTCAAATGAAGCAGGAGCCGGTGAAGCCCGCGCCATGGCCGAGAAGATTAATGAGATTAATGCCTTTGCCTATTTGGACCTATTTGGAGTGTTCGGCTAAGTCCGAGATGTTTTCGAGACGGCAACTATAGGGCCGCGCTGCAAGTCAAAAAGGGAAGAAGACCAGATGCCTTTTGCTCACACATACACACCTTTTACAACAA

Full Affymetrix probeset data:

Annotations for 1626808_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720