FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1626823_a_at:

>probe:Drosophila_2:1626823_a_at:556:53; Interrogation_Position=1014; Antisense; ATGTTGGGCCGGTCGACAAGAAGTT
>probe:Drosophila_2:1626823_a_at:602:715; Interrogation_Position=1037; Antisense; TTCGAGAGCGTTTTGCTTGGCTGCA
>probe:Drosophila_2:1626823_a_at:519:727; Interrogation_Position=1053; Antisense; TTGGCTGCACTCTGGACGATCAGAA
>probe:Drosophila_2:1626823_a_at:591:211; Interrogation_Position=1076; Antisense; AAGAACATCAAGAAGCGGCTCCAGG
>probe:Drosophila_2:1626823_a_at:256:573; Interrogation_Position=1092; Antisense; GGCTCCAGGCCTTAATGGCTTATCT
>probe:Drosophila_2:1626823_a_at:204:379; Interrogation_Position=661; Antisense; GAAGCTGCGCAAGGATGCACTCAAC
>probe:Drosophila_2:1626823_a_at:623:147; Interrogation_Position=702; Antisense; ACTACCTTCTGATGTCCATGGATCT
>probe:Drosophila_2:1626823_a_at:727:663; Interrogation_Position=792; Antisense; TACAACGGGTGAGCTCTCGCTTGGC
>probe:Drosophila_2:1626823_a_at:377:329; Interrogation_Position=829; Antisense; GCGTGTGCGCACTGTTCGGGACAAC
>probe:Drosophila_2:1626823_a_at:328:469; Interrogation_Position=842; Antisense; GTTCGGGACAACTCTCAGGAGGATT
>probe:Drosophila_2:1626823_a_at:441:547; Interrogation_Position=859; Antisense; GGAGGATTCCCTTAGCCAGATAAAT
>probe:Drosophila_2:1626823_a_at:286:531; Interrogation_Position=910; Antisense; GGGTGATCCCGTGATCGGACGCCAA
>probe:Drosophila_2:1626823_a_at:493:411; Interrogation_Position=927; Antisense; GACGCCAACGATGCCAGTTTTACTT
>probe:Drosophila_2:1626823_a_at:432:617; Interrogation_Position=962; Antisense; TGCAGCAGCTCAATGGATCCATCCG

Paste this into a BLAST search page for me
ATGTTGGGCCGGTCGACAAGAAGTTTTCGAGAGCGTTTTGCTTGGCTGCATTGGCTGCACTCTGGACGATCAGAAAAGAACATCAAGAAGCGGCTCCAGGGGCTCCAGGCCTTAATGGCTTATCTGAAGCTGCGCAAGGATGCACTCAACACTACCTTCTGATGTCCATGGATCTTACAACGGGTGAGCTCTCGCTTGGCGCGTGTGCGCACTGTTCGGGACAACGTTCGGGACAACTCTCAGGAGGATTGGAGGATTCCCTTAGCCAGATAAATGGGTGATCCCGTGATCGGACGCCAAGACGCCAACGATGCCAGTTTTACTTTGCAGCAGCTCAATGGATCCATCCG

Full Affymetrix probeset data:

Annotations for 1626823_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720