FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1626840_a_at:

>probe:Drosophila_2:1626840_a_at:174:541; Interrogation_Position=2513; Antisense; GGTTCGCAAGAACCTTCAGCGTGAT
>probe:Drosophila_2:1626840_a_at:640:519; Interrogation_Position=2547; Antisense; GTGGACACGGACTACATAAGGCAAA
>probe:Drosophila_2:1626840_a_at:53:357; Interrogation_Position=2567; Antisense; GCAAACGTGGTTCCCGGTCTACAGA
>probe:Drosophila_2:1626840_a_at:170:465; Interrogation_Position=2628; Antisense; GATTGCCGCAAAGCATATTACCTCT
>probe:Drosophila_2:1626840_a_at:380:687; Interrogation_Position=2643; Antisense; TATTACCTCTACACGCAGCAGGGAG
>probe:Drosophila_2:1626840_a_at:719:507; Interrogation_Position=2672; Antisense; GTGTGAGATATCCTGCAGCGACGTC
>probe:Drosophila_2:1626840_a_at:525:581; Interrogation_Position=2706; Antisense; TGGCGCATCCAGCAGGTGATCAAGA
>probe:Drosophila_2:1626840_a_at:472:371; Interrogation_Position=2831; Antisense; GAAGAAGGGTTACCTGCTCACCGGC
>probe:Drosophila_2:1626840_a_at:419:253; Interrogation_Position=2855; Antisense; CAAGCGCGTGCTACTAGCCGAGGAG
>probe:Drosophila_2:1626840_a_at:540:171; Interrogation_Position=2942; Antisense; AAAGTAGTGTGCCATGACCAAAGAC
>probe:Drosophila_2:1626840_a_at:128:387; Interrogation_Position=2964; Antisense; GACACAACACCCGAGGCGTTACTTA
>probe:Drosophila_2:1626840_a_at:29:481; Interrogation_Position=3022; Antisense; GTTTGTTCATAGTCACGCTTGAGCC
>probe:Drosophila_2:1626840_a_at:434:135; Interrogation_Position=3036; Antisense; ACGCTTGAGCCCCTTAGTTAAGCAT
>probe:Drosophila_2:1626840_a_at:26:475; Interrogation_Position=3052; Antisense; GTTAAGCATACTTTGTGCTCCGAAA

Paste this into a BLAST search page for me
GGTTCGCAAGAACCTTCAGCGTGATGTGGACACGGACTACATAAGGCAAAGCAAACGTGGTTCCCGGTCTACAGAGATTGCCGCAAAGCATATTACCTCTTATTACCTCTACACGCAGCAGGGAGGTGTGAGATATCCTGCAGCGACGTCTGGCGCATCCAGCAGGTGATCAAGAGAAGAAGGGTTACCTGCTCACCGGCCAAGCGCGTGCTACTAGCCGAGGAGAAAGTAGTGTGCCATGACCAAAGACGACACAACACCCGAGGCGTTACTTAGTTTGTTCATAGTCACGCTTGAGCCACGCTTGAGCCCCTTAGTTAAGCATGTTAAGCATACTTTGTGCTCCGAAA

Full Affymetrix probeset data:

Annotations for 1626840_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720