FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1627060_s_at:

>probe:Drosophila_2:1627060_s_at:29:89; Interrogation_Position=2384; Antisense; AGTACGACCGCAGCTTGGGTGACGA
>probe:Drosophila_2:1627060_s_at:133:611; Interrogation_Position=2403; Antisense; TGACGATGGAGCTCCACTGCTGGAG
>probe:Drosophila_2:1627060_s_at:604:259; Interrogation_Position=2440; Antisense; CACTGTCATCTGAGCTCTGGTGGAT
>probe:Drosophila_2:1627060_s_at:111:437; Interrogation_Position=2500; Antisense; GAGGACTTGGACTCGGACGACATAA
>probe:Drosophila_2:1627060_s_at:727:151; Interrogation_Position=2519; Antisense; ACATAATGCTACTGGATGCTGGCGA
>probe:Drosophila_2:1627060_s_at:522:445; Interrogation_Position=2533; Antisense; GATGCTGGCGATGAGATCTACCTTT
>probe:Drosophila_2:1627060_s_at:671:641; Interrogation_Position=2549; Antisense; TCTACCTTTGGGTTGGCTATGGCGT
>probe:Drosophila_2:1627060_s_at:482:63; Interrogation_Position=2588; Antisense; ATGGGAAGCTTCTGGACACGGCAAA
>probe:Drosophila_2:1627060_s_at:156:637; Interrogation_Position=2648; Antisense; TCGACACGGTGAGCATCATTCGCGT
>probe:Drosophila_2:1627060_s_at:692:347; Interrogation_Position=2705; Antisense; GCATGTTCCCCAACTGGGACGATAA
>probe:Drosophila_2:1627060_s_at:26:703; Interrogation_Position=2730; Antisense; TTATTGGCAGAACCAGCCCAGCTAT
>probe:Drosophila_2:1627060_s_at:428:377; Interrogation_Position=2763; Antisense; GAAGCAACTTGTTATTGATGCCAAC
>probe:Drosophila_2:1627060_s_at:585:475; Interrogation_Position=2845; Antisense; GTTTTTGCCTTTCTAACACCTATGT
>probe:Drosophila_2:1627060_s_at:621:711; Interrogation_Position=2896; Antisense; TTCAATATGGCCACTGTTTAGCACA

Paste this into a BLAST search page for me
AGTACGACCGCAGCTTGGGTGACGATGACGATGGAGCTCCACTGCTGGAGCACTGTCATCTGAGCTCTGGTGGATGAGGACTTGGACTCGGACGACATAAACATAATGCTACTGGATGCTGGCGAGATGCTGGCGATGAGATCTACCTTTTCTACCTTTGGGTTGGCTATGGCGTATGGGAAGCTTCTGGACACGGCAAATCGACACGGTGAGCATCATTCGCGTGCATGTTCCCCAACTGGGACGATAATTATTGGCAGAACCAGCCCAGCTATGAAGCAACTTGTTATTGATGCCAACGTTTTTGCCTTTCTAACACCTATGTTTCAATATGGCCACTGTTTAGCACA

Full Affymetrix probeset data:

Annotations for 1627060_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720