FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1627100_s_at:

>probe:Drosophila_2:1627100_s_at:542:149; Interrogation_Position=1645; Antisense; ACTTCCGAAATTTGAGTTGCAACAT
>probe:Drosophila_2:1627100_s_at:535:373; Interrogation_Position=1676; Antisense; GAAGTCCATTCAATCCTACAAGCAT
>probe:Drosophila_2:1627100_s_at:564:351; Interrogation_Position=1728; Antisense; GCAGAAATCAACAGAAGTCCCAGCA
>probe:Drosophila_2:1627100_s_at:503:373; Interrogation_Position=1741; Antisense; GAAGTCCCAGCAAAACTCAGCAAAC
>probe:Drosophila_2:1627100_s_at:579:469; Interrogation_Position=1801; Antisense; GTTGCTGCTAGATTTCTCATATGTG
>probe:Drosophila_2:1627100_s_at:177:647; Interrogation_Position=1817; Antisense; TCATATGTGTTGCACGTGCTGCCAG
>probe:Drosophila_2:1627100_s_at:535:391; Interrogation_Position=1843; Antisense; GAAAGTGCAATTAAGCCACAGCTTC
>probe:Drosophila_2:1627100_s_at:615:311; Interrogation_Position=1857; Antisense; GCCACAGCTTCTTGGGCTTTTAAAA
>probe:Drosophila_2:1627100_s_at:563:419; Interrogation_Position=1907; Antisense; GAGCAGCACACCAGCAACATGCAGC
>probe:Drosophila_2:1627100_s_at:128:665; Interrogation_Position=1933; Antisense; TACAGCATGCGACGCGGATGCAAAA
>probe:Drosophila_2:1627100_s_at:255:233; Interrogation_Position=1956; Antisense; AATGCAGCATGCAACGTGCGACAAC
>probe:Drosophila_2:1627100_s_at:62:255; Interrogation_Position=1967; Antisense; CAACGTGCGACAACTATCAGCTGCA
>probe:Drosophila_2:1627100_s_at:333:35; Interrogation_Position=1982; Antisense; ATCAGCTGCAATTATCTTGCCTTAA
>probe:Drosophila_2:1627100_s_at:692:257; Interrogation_Position=2034; Antisense; CACACACTCTCGCTTATTTTATGAA

Paste this into a BLAST search page for me
ACTTCCGAAATTTGAGTTGCAACATGAAGTCCATTCAATCCTACAAGCATGCAGAAATCAACAGAAGTCCCAGCAGAAGTCCCAGCAAAACTCAGCAAACGTTGCTGCTAGATTTCTCATATGTGTCATATGTGTTGCACGTGCTGCCAGGAAAGTGCAATTAAGCCACAGCTTCGCCACAGCTTCTTGGGCTTTTAAAAGAGCAGCACACCAGCAACATGCAGCTACAGCATGCGACGCGGATGCAAAAAATGCAGCATGCAACGTGCGACAACCAACGTGCGACAACTATCAGCTGCAATCAGCTGCAATTATCTTGCCTTAACACACACTCTCGCTTATTTTATGAA

Full Affymetrix probeset data:

Annotations for 1627100_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720