FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1627178_at:

>probe:Drosophila_2:1627178_at:730:411; Interrogation_Position=121; Antisense; GACCTAAAGTTGACTGTACGGCCAA
>probe:Drosophila_2:1627178_at:233:487; Interrogation_Position=136; Antisense; GTACGGCCAACGGAACTCAGACGGA
>probe:Drosophila_2:1627178_at:423:83; Interrogation_Position=160; Antisense; AGTGTCCTGTAGCATGTCCTGAAAC
>probe:Drosophila_2:1627178_at:204:135; Interrogation_Position=18; Antisense; ACGTATTCCCCATCTACAATGACGG
>probe:Drosophila_2:1627178_at:70:393; Interrogation_Position=180; Antisense; GAAACCTGCGAGTACTCCGGCAATG
>probe:Drosophila_2:1627178_at:358:67; Interrogation_Position=202; Antisense; ATGGACCCTGCGTCAAGATGTGCGG
>probe:Drosophila_2:1627178_at:473:117; Interrogation_Position=227; Antisense; AGCTCCTTGTGTGTGTAAGCCGGGA
>probe:Drosophila_2:1627178_at:158:231; Interrogation_Position=261; Antisense; AATGAGAGGATTCCGGCCTGTGTTC
>probe:Drosophila_2:1627178_at:632:471; Interrogation_Position=282; Antisense; GTTCTGCGATCCGATTGCCCAAAAG
>probe:Drosophila_2:1627178_at:676:681; Interrogation_Position=326; Antisense; TATGCTACTGGGTGTATCGAACTTT
>probe:Drosophila_2:1627178_at:474:605; Interrogation_Position=450; Antisense; TGATCTATGCTGATCCGATCCGATT
>probe:Drosophila_2:1627178_at:575:553; Interrogation_Position=49; Antisense; GGAGCTTGAAGATCTGTGCCTGTCT
>probe:Drosophila_2:1627178_at:249:499; Interrogation_Position=70; Antisense; GTCTGGGCCTTCTATTACTTTTCAA
>probe:Drosophila_2:1627178_at:600:689; Interrogation_Position=82; Antisense; TATTACTTTTCAAACCCATCGACTC

Paste this into a BLAST search page for me
GACCTAAAGTTGACTGTACGGCCAAGTACGGCCAACGGAACTCAGACGGAAGTGTCCTGTAGCATGTCCTGAAACACGTATTCCCCATCTACAATGACGGGAAACCTGCGAGTACTCCGGCAATGATGGACCCTGCGTCAAGATGTGCGGAGCTCCTTGTGTGTGTAAGCCGGGAAATGAGAGGATTCCGGCCTGTGTTCGTTCTGCGATCCGATTGCCCAAAAGTATGCTACTGGGTGTATCGAACTTTTGATCTATGCTGATCCGATCCGATTGGAGCTTGAAGATCTGTGCCTGTCTGTCTGGGCCTTCTATTACTTTTCAATATTACTTTTCAAACCCATCGACTC

Full Affymetrix probeset data:

Annotations for 1627178_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720