FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1627242_at:

>probe:Drosophila_2:1627242_at:175:591; Interrogation_Position=587; Antisense; TGGTCCCTCCTCCAAGGAGGACAAC
>probe:Drosophila_2:1627242_at:475:209; Interrogation_Position=615; Antisense; AAGAAGGTGGAGACCTCCACCGCCT
>probe:Drosophila_2:1627242_at:124:519; Interrogation_Position=621; Antisense; GTGGAGACCTCCACCGCCTAGGACT
>probe:Drosophila_2:1627242_at:302:133; Interrogation_Position=633; Antisense; ACCGCCTAGGACTCAATCCTTTTGT
>probe:Drosophila_2:1627242_at:716:679; Interrogation_Position=639; Antisense; TAGGACTCAATCCTTTTGTACCGCC
>probe:Drosophila_2:1627242_at:422:233; Interrogation_Position=647; Antisense; AATCCTTTTGTACCGCCTTCAGTGT
>probe:Drosophila_2:1627242_at:359:693; Interrogation_Position=653; Antisense; TTTGTACCGCCTTCAGTGTTAGTTA
>probe:Drosophila_2:1627242_at:101:489; Interrogation_Position=656; Antisense; GTACCGCCTTCAGTGTTAGTTAGTT
>probe:Drosophila_2:1627242_at:280:301; Interrogation_Position=659; Antisense; CCGCCTTCAGTGTTAGTTAGTTTAT
>probe:Drosophila_2:1627242_at:372:475; Interrogation_Position=674; Antisense; GTTAGTTTATGTCTACGTGTGCCTT
>probe:Drosophila_2:1627242_at:147:477; Interrogation_Position=678; Antisense; GTTTATGTCTACGTGTGCCTTATAT
>probe:Drosophila_2:1627242_at:556:59; Interrogation_Position=682; Antisense; ATGTCTACGTGTGCCTTATATATTG
>probe:Drosophila_2:1627242_at:241:507; Interrogation_Position=692; Antisense; GTGCCTTATATATTGGACTCTACAT
>probe:Drosophila_2:1627242_at:216:3; Interrogation_Position=703; Antisense; ATTGGACTCTACATATTTTATATCA

Paste this into a BLAST search page for me
TGGTCCCTCCTCCAAGGAGGACAACAAGAAGGTGGAGACCTCCACCGCCTGTGGAGACCTCCACCGCCTAGGACTACCGCCTAGGACTCAATCCTTTTGTTAGGACTCAATCCTTTTGTACCGCCAATCCTTTTGTACCGCCTTCAGTGTTTTGTACCGCCTTCAGTGTTAGTTAGTACCGCCTTCAGTGTTAGTTAGTTCCGCCTTCAGTGTTAGTTAGTTTATGTTAGTTTATGTCTACGTGTGCCTTGTTTATGTCTACGTGTGCCTTATATATGTCTACGTGTGCCTTATATATTGGTGCCTTATATATTGGACTCTACATATTGGACTCTACATATTTTATATCA

Full Affymetrix probeset data:

Annotations for 1627242_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720