FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1627251_s_at:

>probe:Drosophila_2:1627251_s_at:19:299; Interrogation_Position=1009; Antisense; CGCACCTATTCCTATTATACGCATA
>probe:Drosophila_2:1627251_s_at:71:29; Interrogation_Position=1025; Antisense; ATACGCATATCTATAGTTAACTACC
>probe:Drosophila_2:1627251_s_at:511:101; Interrogation_Position=1116; Antisense; AGAGCACTCTGCATATTAAACGCCT
>probe:Drosophila_2:1627251_s_at:604:707; Interrogation_Position=1131; Antisense; TTAAACGCCTCGATGCACAGCAACA
>probe:Drosophila_2:1627251_s_at:90:113; Interrogation_Position=1161; Antisense; AGCAACAGCAACGACTGAGGCAAAA
>probe:Drosophila_2:1627251_s_at:523:459; Interrogation_Position=1244; Antisense; GATTTGAATCGCATCGACGAATCGA
>probe:Drosophila_2:1627251_s_at:456:635; Interrogation_Position=1257; Antisense; TCGACGAATCGAACAGCGGCATCAA
>probe:Drosophila_2:1627251_s_at:575:161; Interrogation_Position=1304; Antisense; ACAATTTGTGCGATGCGAAACCGAA
>probe:Drosophila_2:1627251_s_at:205:683; Interrogation_Position=1336; Antisense; TATGCATACCTTATTGTTTTTATCA
>probe:Drosophila_2:1627251_s_at:79:655; Interrogation_Position=1391; Antisense; TAATTTATAACACTCACAAAGCGGG
>probe:Drosophila_2:1627251_s_at:446:303; Interrogation_Position=1452; Antisense; CCGACTCCGGCATTGTGCCAAAGAA
>probe:Drosophila_2:1627251_s_at:370:211; Interrogation_Position=1489; Antisense; AAGAGCAGCGCACAAAAACTACCAG
>probe:Drosophila_2:1627251_s_at:591:299; Interrogation_Position=1510; Antisense; CCAGCTGAAAGCGATTGTTGTTAAC
>probe:Drosophila_2:1627251_s_at:595:681; Interrogation_Position=994; Antisense; TATGTAACCGTTAAGCGCACCTATT

Paste this into a BLAST search page for me
CGCACCTATTCCTATTATACGCATAATACGCATATCTATAGTTAACTACCAGAGCACTCTGCATATTAAACGCCTTTAAACGCCTCGATGCACAGCAACAAGCAACAGCAACGACTGAGGCAAAAGATTTGAATCGCATCGACGAATCGATCGACGAATCGAACAGCGGCATCAAACAATTTGTGCGATGCGAAACCGAATATGCATACCTTATTGTTTTTATCATAATTTATAACACTCACAAAGCGGGCCGACTCCGGCATTGTGCCAAAGAAAAGAGCAGCGCACAAAAACTACCAGCCAGCTGAAAGCGATTGTTGTTAACTATGTAACCGTTAAGCGCACCTATT

Full Affymetrix probeset data:

Annotations for 1627251_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720