FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1627261_s_at:

>probe:Drosophila_2:1627261_s_at:461:295; Interrogation_Position=2035; Antisense; CGCAAGGAGTAAGCGGGCATCCCCA
>probe:Drosophila_2:1627261_s_at:469:367; Interrogation_Position=2066; Antisense; GAATCCGAAAACAAACACTGCAACT
>probe:Drosophila_2:1627261_s_at:557:7; Interrogation_Position=2117; Antisense; ATTCCAAAAGCCAGCGGTTGCGAAG
>probe:Drosophila_2:1627261_s_at:280:185; Interrogation_Position=2153; Antisense; AAAATGTTTGTTCGCCAAGGCAGCC
>probe:Drosophila_2:1627261_s_at:632:157; Interrogation_Position=2208; Antisense; ACACACACACTCGTTTCGGTTTAGT
>probe:Drosophila_2:1627261_s_at:279:639; Interrogation_Position=2223; Antisense; TCGGTTTAGTCAACTCTGTACGTAC
>probe:Drosophila_2:1627261_s_at:572:289; Interrogation_Position=2243; Antisense; CGTACTTTTGCCGTATTATCGTTGC
>probe:Drosophila_2:1627261_s_at:307:705; Interrogation_Position=2258; Antisense; TTATCGTTGCATTTCTGTCGTGTTC
>probe:Drosophila_2:1627261_s_at:656:503; Interrogation_Position=2294; Antisense; GTCCCCATATCTCCTATACATATAT
>probe:Drosophila_2:1627261_s_at:654:687; Interrogation_Position=2314; Antisense; TATATAGCACCCTTACACAGAGCCA
>probe:Drosophila_2:1627261_s_at:319:709; Interrogation_Position=2326; Antisense; TTACACAGAGCCAGCCGCGATGGCA
>probe:Drosophila_2:1627261_s_at:706:293; Interrogation_Position=2343; Antisense; CGATGGCACCGCTTTATAGTGTTTA
>probe:Drosophila_2:1627261_s_at:416:513; Interrogation_Position=2374; Antisense; GTGATGATCCTCCTTTTGATTTGTG
>probe:Drosophila_2:1627261_s_at:629:89; Interrogation_Position=2564; Antisense; AGTTTCCATTTTCATTTGTACCGAT

Paste this into a BLAST search page for me
CGCAAGGAGTAAGCGGGCATCCCCAGAATCCGAAAACAAACACTGCAACTATTCCAAAAGCCAGCGGTTGCGAAGAAAATGTTTGTTCGCCAAGGCAGCCACACACACACTCGTTTCGGTTTAGTTCGGTTTAGTCAACTCTGTACGTACCGTACTTTTGCCGTATTATCGTTGCTTATCGTTGCATTTCTGTCGTGTTCGTCCCCATATCTCCTATACATATATTATATAGCACCCTTACACAGAGCCATTACACAGAGCCAGCCGCGATGGCACGATGGCACCGCTTTATAGTGTTTAGTGATGATCCTCCTTTTGATTTGTGAGTTTCCATTTTCATTTGTACCGAT

Full Affymetrix probeset data:

Annotations for 1627261_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720