FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1627280_s_at:

>probe:Drosophila_2:1627280_s_at:632:53; Interrogation_Position=2502; Antisense; ATGAAAACCCTAGCGTATCCTACTC
>probe:Drosophila_2:1627280_s_at:431:683; Interrogation_Position=2517; Antisense; TATCCTACTCTTATTCCTACCACAT
>probe:Drosophila_2:1627280_s_at:684:21; Interrogation_Position=2565; Antisense; ATATATCTATTGTTGGGCCCAGCCG
>probe:Drosophila_2:1627280_s_at:273:227; Interrogation_Position=2596; Antisense; AAGGCTTCTATTCGCACAGCAATCG
>probe:Drosophila_2:1627280_s_at:183:237; Interrogation_Position=2616; Antisense; AATCGTCCAGCGACGGCGTTGCATT
>probe:Drosophila_2:1627280_s_at:114:289; Interrogation_Position=2629; Antisense; CGGCGTTGCATTTGTTTTCTACATA
>probe:Drosophila_2:1627280_s_at:619:25; Interrogation_Position=2675; Antisense; ATAGCAGTTGCAGTATTTTACCAAT
>probe:Drosophila_2:1627280_s_at:414:21; Interrogation_Position=2700; Antisense; ATATATCCACGCATTACTTGACGAA
>probe:Drosophila_2:1627280_s_at:9:411; Interrogation_Position=2719; Antisense; GACGAAACACATTTGCTAGCCTAAT
>probe:Drosophila_2:1627280_s_at:615:339; Interrogation_Position=2733; Antisense; GCTAGCCTAATGAATTGAACACGCA
>probe:Drosophila_2:1627280_s_at:337:431; Interrogation_Position=2849; Antisense; GAGTGCGAGGCGAAATTGATCCTAA
>probe:Drosophila_2:1627280_s_at:700:295; Interrogation_Position=2893; Antisense; CGAATCCATGTATAACGTATGCTAT
>probe:Drosophila_2:1627280_s_at:160:219; Interrogation_Position=2952; Antisense; AAGTCATTGAACACCCGAACACACA
>probe:Drosophila_2:1627280_s_at:594:359; Interrogation_Position=2994; Antisense; GCAAGCGCAGCAGAAAACATCAAGA

Paste this into a BLAST search page for me
ATGAAAACCCTAGCGTATCCTACTCTATCCTACTCTTATTCCTACCACATATATATCTATTGTTGGGCCCAGCCGAAGGCTTCTATTCGCACAGCAATCGAATCGTCCAGCGACGGCGTTGCATTCGGCGTTGCATTTGTTTTCTACATAATAGCAGTTGCAGTATTTTACCAATATATATCCACGCATTACTTGACGAAGACGAAACACATTTGCTAGCCTAATGCTAGCCTAATGAATTGAACACGCAGAGTGCGAGGCGAAATTGATCCTAACGAATCCATGTATAACGTATGCTATAAGTCATTGAACACCCGAACACACAGCAAGCGCAGCAGAAAACATCAAGA

Full Affymetrix probeset data:

Annotations for 1627280_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720