FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1627288_a_at:

>probe:Drosophila_2:1627288_a_at:711:217; Interrogation_Position=2216; Antisense; AAGTATCTGATACTGCCATACCGCT
>probe:Drosophila_2:1627288_a_at:266:471; Interrogation_Position=2254; Antisense; GTTCCTCAAGAGATCGCAGTAGCTG
>probe:Drosophila_2:1627288_a_at:296:205; Interrogation_Position=2299; Antisense; AAGCCGGCAGAGGTCATTGTTGAAC
>probe:Drosophila_2:1627288_a_at:567:467; Interrogation_Position=2317; Antisense; GTTGAACAGAGCACCATCCCAATAG
>probe:Drosophila_2:1627288_a_at:292:353; Interrogation_Position=2344; Antisense; GCACCAGTCCCGGAGGTTTCAAAAT
>probe:Drosophila_2:1627288_a_at:312:629; Interrogation_Position=2394; Antisense; TCCAGCTGCCGAAGTACCAATTACG
>probe:Drosophila_2:1627288_a_at:572:215; Interrogation_Position=2459; Antisense; AAGTTGTTCCCACCATTGCAGAGAA
>probe:Drosophila_2:1627288_a_at:524:611; Interrogation_Position=2490; Antisense; TGAAGAGGTTCCCACTTCGGAAATC
>probe:Drosophila_2:1627288_a_at:627:559; Interrogation_Position=2508; Antisense; GGAAATCCCCGAACAATCATCGTCA
>probe:Drosophila_2:1627288_a_at:600:461; Interrogation_Position=2539; Antisense; GATTCCGTTCCCGTAGCAAAGATAA
>probe:Drosophila_2:1627288_a_at:76:101; Interrogation_Position=2575; Antisense; AGAGATCTTCAGACCACCGATGTTT
>probe:Drosophila_2:1627288_a_at:216:131; Interrogation_Position=2590; Antisense; ACCGATGTTTCGCTATTGGCTATTG
>probe:Drosophila_2:1627288_a_at:122:353; Interrogation_Position=2614; Antisense; GCAGCCACCCTGGATGCCATTGGAG
>probe:Drosophila_2:1627288_a_at:476:423; Interrogation_Position=2698; Antisense; GAGAAAATTCTTGGTCCTCCCAAAT

Paste this into a BLAST search page for me
AAGTATCTGATACTGCCATACCGCTGTTCCTCAAGAGATCGCAGTAGCTGAAGCCGGCAGAGGTCATTGTTGAACGTTGAACAGAGCACCATCCCAATAGGCACCAGTCCCGGAGGTTTCAAAATTCCAGCTGCCGAAGTACCAATTACGAAGTTGTTCCCACCATTGCAGAGAATGAAGAGGTTCCCACTTCGGAAATCGGAAATCCCCGAACAATCATCGTCAGATTCCGTTCCCGTAGCAAAGATAAAGAGATCTTCAGACCACCGATGTTTACCGATGTTTCGCTATTGGCTATTGGCAGCCACCCTGGATGCCATTGGAGGAGAAAATTCTTGGTCCTCCCAAAT

Full Affymetrix probeset data:

Annotations for 1627288_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720