FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1627326_a_at:

>probe:Drosophila_2:1627326_a_at:670:577; Interrogation_Position=2897; Antisense; GGCCGCCATATACACACTTACATAA
>probe:Drosophila_2:1627326_a_at:479:37; Interrogation_Position=2957; Antisense; ATCTCACTCATTTTTCTAGGTTCGT
>probe:Drosophila_2:1627326_a_at:307:279; Interrogation_Position=2972; Antisense; CTAGGTTCGTAGTTCATTTATGTAA
>probe:Drosophila_2:1627326_a_at:604:363; Interrogation_Position=3071; Antisense; GAATCAAATCACACAAGTCACAAGT
>probe:Drosophila_2:1627326_a_at:462:495; Interrogation_Position=3087; Antisense; GTCACAAGTTATTTATGCGAGTTTT
>probe:Drosophila_2:1627326_a_at:236:507; Interrogation_Position=3146; Antisense; GTGCTACAATCGTCAGCTAGTTTTT
>probe:Drosophila_2:1627326_a_at:160:603; Interrogation_Position=3171; Antisense; TGTTAAACTTTTCCCATCACACCCA
>probe:Drosophila_2:1627326_a_at:657:271; Interrogation_Position=3185; Antisense; CATCACACCCATACGAGCGAAATAT
>probe:Drosophila_2:1627326_a_at:384:289; Interrogation_Position=3210; Antisense; CGGGCCAAAATTACGACTAGCGATT
>probe:Drosophila_2:1627326_a_at:109:487; Interrogation_Position=3340; Antisense; GTAGATCTACGATTAACTGTGGTAA
>probe:Drosophila_2:1627326_a_at:409:663; Interrogation_Position=3362; Antisense; TAAACATTTTCTACCGGCGCTGCAT
>probe:Drosophila_2:1627326_a_at:535:323; Interrogation_Position=3378; Antisense; GCGCTGCATCATTTCTACGATACGA
>probe:Drosophila_2:1627326_a_at:38:367; Interrogation_Position=3401; Antisense; GAATCGAATTGTACTAGACCCCTAA
>probe:Drosophila_2:1627326_a_at:565:411; Interrogation_Position=3417; Antisense; GACCCCTAAGTCTTGGAATATACAA

Paste this into a BLAST search page for me
GGCCGCCATATACACACTTACATAAATCTCACTCATTTTTCTAGGTTCGTCTAGGTTCGTAGTTCATTTATGTAAGAATCAAATCACACAAGTCACAAGTGTCACAAGTTATTTATGCGAGTTTTGTGCTACAATCGTCAGCTAGTTTTTTGTTAAACTTTTCCCATCACACCCACATCACACCCATACGAGCGAAATATCGGGCCAAAATTACGACTAGCGATTGTAGATCTACGATTAACTGTGGTAATAAACATTTTCTACCGGCGCTGCATGCGCTGCATCATTTCTACGATACGAGAATCGAATTGTACTAGACCCCTAAGACCCCTAAGTCTTGGAATATACAA

Full Affymetrix probeset data:

Annotations for 1627326_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720