FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1627343_a_at:

>probe:Drosophila_2:1627343_a_at:135:73; Interrogation_Position=1442; Antisense; AGGATCGTCCGTGTGCTCTATGGAG
>probe:Drosophila_2:1627343_a_at:557:349; Interrogation_Position=1506; Antisense; GCAGACTTCAAGGATCGTCACCTAC
>probe:Drosophila_2:1627343_a_at:461:135; Interrogation_Position=1537; Antisense; ACGCTGTTCTCTCTTTGGTGCATGG
>probe:Drosophila_2:1627343_a_at:476:347; Interrogation_Position=1556; Antisense; GCATGGTTTTCTCGCAGATTCTAAC
>probe:Drosophila_2:1627343_a_at:242:661; Interrogation_Position=1602; Antisense; TAACGTGACGTCCTTCGATGGTATT
>probe:Drosophila_2:1627343_a_at:378:395; Interrogation_Position=1698; Antisense; GAAATTGTCGTTCAAGGTGCCCTTG
>probe:Drosophila_2:1627343_a_at:623:671; Interrogation_Position=1733; Antisense; TACCCGGCATTTCCATTTTGATCAA
>probe:Drosophila_2:1627343_a_at:208:403; Interrogation_Position=1780; Antisense; GACATTCTCACATGGATTCGCTTCA
>probe:Drosophila_2:1627343_a_at:264:11; Interrogation_Position=1795; Antisense; ATTCGCTTCAGTATATGGATCGCCA
>probe:Drosophila_2:1627343_a_at:531:679; Interrogation_Position=1808; Antisense; TATGGATCGCCATAGGCCTGGCAAT
>probe:Drosophila_2:1627343_a_at:102:585; Interrogation_Position=1826; Antisense; TGGCAATCTTCCTGGCCTATGGCAT
>probe:Drosophila_2:1627343_a_at:274:249; Interrogation_Position=1887; Antisense; CAATTCCATTGCCATGATGCGGGAC
>probe:Drosophila_2:1627343_a_at:570:527; Interrogation_Position=1907; Antisense; GGGACTGCAGCAATTCGGCGTTGTT
>probe:Drosophila_2:1627343_a_at:598:137; Interrogation_Position=1961; Antisense; ACGAGGTGCCCCTGATATTGATGCA

Paste this into a BLAST search page for me
AGGATCGTCCGTGTGCTCTATGGAGGCAGACTTCAAGGATCGTCACCTACACGCTGTTCTCTCTTTGGTGCATGGGCATGGTTTTCTCGCAGATTCTAACTAACGTGACGTCCTTCGATGGTATTGAAATTGTCGTTCAAGGTGCCCTTGTACCCGGCATTTCCATTTTGATCAAGACATTCTCACATGGATTCGCTTCAATTCGCTTCAGTATATGGATCGCCATATGGATCGCCATAGGCCTGGCAATTGGCAATCTTCCTGGCCTATGGCATCAATTCCATTGCCATGATGCGGGACGGGACTGCAGCAATTCGGCGTTGTTACGAGGTGCCCCTGATATTGATGCA

Full Affymetrix probeset data:

Annotations for 1627343_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720