FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1627396_a_at:

>probe:Drosophila_2:1627396_a_at:218:641; Interrogation_Position=1024; Antisense; TCTGGAGCGATCTAAGGATTACATG
>probe:Drosophila_2:1627396_a_at:3:223; Interrogation_Position=1037; Antisense; AAGGATTACATGAACGCTCGTCGTG
>probe:Drosophila_2:1627396_a_at:29:201; Interrogation_Position=1049; Antisense; AACGCTCGTCGTGTTGCCAAAGAGT
>probe:Drosophila_2:1627396_a_at:83:465; Interrogation_Position=1072; Antisense; GTTGGAATACCACACAAAGGGTCTC
>probe:Drosophila_2:1627396_a_at:54:171; Interrogation_Position=1087; Antisense; AAAGGGTCTCAATCGCAATCTGCCA
>probe:Drosophila_2:1627396_a_at:485:553; Interrogation_Position=1153; Antisense; GGAGCTGTGGAAGCGCTTTATCACG
>probe:Drosophila_2:1627396_a_at:17:563; Interrogation_Position=1161; Antisense; GGAAGCGCTTTATCACGTATGAGAA
>probe:Drosophila_2:1627396_a_at:333:57; Interrogation_Position=1179; Antisense; ATGAGAAGTCTAATCCCTTGCGCAC
>probe:Drosophila_2:1627396_a_at:28:235; Interrogation_Position=1190; Antisense; AATCCCTTGCGCACTGAAGATACGG
>probe:Drosophila_2:1627396_a_at:375:323; Interrogation_Position=1198; Antisense; GCGCACTGAAGATACGGCCCTAGTA
>probe:Drosophila_2:1627396_a_at:32:169; Interrogation_Position=1337; Antisense; AAAGGCGTGCGTACTAGTGTTGAAA
>probe:Drosophila_2:1627396_a_at:569:181; Interrogation_Position=1359; Antisense; AAAACATTTCACCTATTCTCTGCGT
>probe:Drosophila_2:1627396_a_at:46:715; Interrogation_Position=1374; Antisense; TTCTCTGCGTTCCTGTAGTGAATCA
>probe:Drosophila_2:1627396_a_at:530:31; Interrogation_Position=1395; Antisense; ATCAAATAGAGTGGGTTATGGCCTT

Paste this into a BLAST search page for me
TCTGGAGCGATCTAAGGATTACATGAAGGATTACATGAACGCTCGTCGTGAACGCTCGTCGTGTTGCCAAAGAGTGTTGGAATACCACACAAAGGGTCTCAAAGGGTCTCAATCGCAATCTGCCAGGAGCTGTGGAAGCGCTTTATCACGGGAAGCGCTTTATCACGTATGAGAAATGAGAAGTCTAATCCCTTGCGCACAATCCCTTGCGCACTGAAGATACGGGCGCACTGAAGATACGGCCCTAGTAAAAGGCGTGCGTACTAGTGTTGAAAAAAACATTTCACCTATTCTCTGCGTTTCTCTGCGTTCCTGTAGTGAATCAATCAAATAGAGTGGGTTATGGCCTT

Full Affymetrix probeset data:

Annotations for 1627396_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720