FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1627400_a_at:

>probe:Drosophila_2:1627400_a_at:325:403; Interrogation_Position=1553; Antisense; GACTTTGAATTGGACCGCGGCGTTT
>probe:Drosophila_2:1627400_a_at:280:325; Interrogation_Position=1572; Antisense; GCGTTTTGCTCCTTAGGTATGTCTT
>probe:Drosophila_2:1627400_a_at:562:499; Interrogation_Position=1616; Antisense; GTCGGCACCATGTTTGACTTGCTAG
>probe:Drosophila_2:1627400_a_at:121:433; Interrogation_Position=1644; Antisense; GAGTGACACCGCTCCGTAGGAATGA
>probe:Drosophila_2:1627400_a_at:462:563; Interrogation_Position=1662; Antisense; GGAATGACCAGGACTTGCACCTCTT
>probe:Drosophila_2:1627400_a_at:369:403; Interrogation_Position=1694; Antisense; GACTATGAAGGCTCCATCGTTGCTC
>probe:Drosophila_2:1627400_a_at:379:291; Interrogation_Position=1803; Antisense; CGGGCTGGCAGATGCGTGACTATCT
>probe:Drosophila_2:1627400_a_at:512:493; Interrogation_Position=1829; Antisense; GTCAAGTTCGATGGACCCGTCAGGG
>probe:Drosophila_2:1627400_a_at:551:407; Interrogation_Position=1866; Antisense; GAGTTAAGTACCAGCGGCCGTCGGA
>probe:Drosophila_2:1627400_a_at:93:479; Interrogation_Position=1914; Antisense; GTTTCGTGTATGTGGACGGCCTGAC
>probe:Drosophila_2:1627400_a_at:697:141; Interrogation_Position=1929; Antisense; ACGGCCTGACGCTGGAGGATTTAAA
>probe:Drosophila_2:1627400_a_at:254:559; Interrogation_Position=1962; Antisense; GGACAGATATTCCAGTCTACAGCAA
>probe:Drosophila_2:1627400_a_at:438:231; Interrogation_Position=1997; Antisense; AATGAGCAGCGAGCTTGAAGCCCAA
>probe:Drosophila_2:1627400_a_at:310:17; Interrogation_Position=2088; Antisense; ATTTTCACGCTGTTGCAGTGTTCAA

Paste this into a BLAST search page for me
GACTTTGAATTGGACCGCGGCGTTTGCGTTTTGCTCCTTAGGTATGTCTTGTCGGCACCATGTTTGACTTGCTAGGAGTGACACCGCTCCGTAGGAATGAGGAATGACCAGGACTTGCACCTCTTGACTATGAAGGCTCCATCGTTGCTCCGGGCTGGCAGATGCGTGACTATCTGTCAAGTTCGATGGACCCGTCAGGGGAGTTAAGTACCAGCGGCCGTCGGAGTTTCGTGTATGTGGACGGCCTGACACGGCCTGACGCTGGAGGATTTAAAGGACAGATATTCCAGTCTACAGCAAAATGAGCAGCGAGCTTGAAGCCCAAATTTTCACGCTGTTGCAGTGTTCAA

Full Affymetrix probeset data:

Annotations for 1627400_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720