FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1627408_at:

>probe:Drosophila_2:1627408_at:298:275; Interrogation_Position=1825; Antisense; CTTGCATTTGCATCTCAGGACTTTA
>probe:Drosophila_2:1627408_at:2:147; Interrogation_Position=1844; Antisense; ACTTTAGGTTGGTGTCGCTGTTCAA
>probe:Drosophila_2:1627408_at:494:557; Interrogation_Position=1869; Antisense; GGACTTGCAATCCTTCGAATGCGTT
>probe:Drosophila_2:1627408_at:572:31; Interrogation_Position=1958; Antisense; ATAATCCTCTTGGTATATCCCTGTG
>probe:Drosophila_2:1627408_at:127:685; Interrogation_Position=1973; Antisense; TATCCCTGTGGCAGCTTCTTAAGGA
>probe:Drosophila_2:1627408_at:232:539; Interrogation_Position=2011; Antisense; GGTAATCTTCAATCCTTAATTCTGG
>probe:Drosophila_2:1627408_at:666:459; Interrogation_Position=2096; Antisense; GATTACGACTCGGTTTGGCCAAGAA
>probe:Drosophila_2:1627408_at:259:395; Interrogation_Position=2167; Antisense; GAAATTACATCGACCCATTACGCAG
>probe:Drosophila_2:1627408_at:353:613; Interrogation_Position=2199; Antisense; TGAAAGCAACTTCCTCTATTCCTTT
>probe:Drosophila_2:1627408_at:619:249; Interrogation_Position=2249; Antisense; CAATATCTCTTTATCGGTTCTACGA
>probe:Drosophila_2:1627408_at:189:41; Interrogation_Position=2261; Antisense; ATCGGTTCTACGATTTCCTCAGAAA
>probe:Drosophila_2:1627408_at:518:115; Interrogation_Position=2318; Antisense; AGCTGTTTCGAAATCCCTACGAGCA
>probe:Drosophila_2:1627408_at:317:343; Interrogation_Position=2340; Antisense; GCACCCGCCTTTCAAATTGCGTGGA
>probe:Drosophila_2:1627408_at:405:7; Interrogation_Position=2355; Antisense; ATTGCGTGGAGTTTGGTCAGACTTC

Paste this into a BLAST search page for me
CTTGCATTTGCATCTCAGGACTTTAACTTTAGGTTGGTGTCGCTGTTCAAGGACTTGCAATCCTTCGAATGCGTTATAATCCTCTTGGTATATCCCTGTGTATCCCTGTGGCAGCTTCTTAAGGAGGTAATCTTCAATCCTTAATTCTGGGATTACGACTCGGTTTGGCCAAGAAGAAATTACATCGACCCATTACGCAGTGAAAGCAACTTCCTCTATTCCTTTCAATATCTCTTTATCGGTTCTACGAATCGGTTCTACGATTTCCTCAGAAAAGCTGTTTCGAAATCCCTACGAGCAGCACCCGCCTTTCAAATTGCGTGGAATTGCGTGGAGTTTGGTCAGACTTC

Full Affymetrix probeset data:

Annotations for 1627408_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720