FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1627420_s_at:

>probe:Drosophila_2:1627420_s_at:686:649; Interrogation_Position=1905; Antisense; TCACCGCCATTATAGCCAGCATTGT
>probe:Drosophila_2:1627420_s_at:620:115; Interrogation_Position=1922; Antisense; AGCATTGTCCTGGTAATTGGTCTGG
>probe:Drosophila_2:1627420_s_at:664:241; Interrogation_Position=1936; Antisense; AATTGGTCTGGTCATCGGATTCGTC
>probe:Drosophila_2:1627420_s_at:201:351; Interrogation_Position=1989; Antisense; GCAGCGATTACGGAGTACAACCCAT
>probe:Drosophila_2:1627420_s_at:10:527; Interrogation_Position=2032; Antisense; GGGCAGCAATCTGTCGCAGTTCTCG
>probe:Drosophila_2:1627420_s_at:680:281; Interrogation_Position=2071; Antisense; CTCGGTGGCCAGCAAGTTCAATAAT
>probe:Drosophila_2:1627420_s_at:616:335; Interrogation_Position=2132; Antisense; GCTGCCAATGCCTAACACGGTGTTA
>probe:Drosophila_2:1627420_s_at:634:539; Interrogation_Position=2169; Antisense; GGTTCAAATTCCGAGCTAGCTGCAC
>probe:Drosophila_2:1627420_s_at:356:341; Interrogation_Position=2183; Antisense; GCTAGCTGCACAAGTTTCGAGCCAA
>probe:Drosophila_2:1627420_s_at:130:131; Interrogation_Position=2236; Antisense; ACCGAAAGACTTCCTGTGCGTGCTA
>probe:Drosophila_2:1627420_s_at:79:509; Interrogation_Position=2251; Antisense; GTGCGTGCTATCCTGTACATATGTA
>probe:Drosophila_2:1627420_s_at:202:675; Interrogation_Position=2274; Antisense; TAGGTGCTCCCTGTATTAATTTCCA
>probe:Drosophila_2:1627420_s_at:674:169; Interrogation_Position=2300; Antisense; AAAGGAGCTGATCCCATTGCCAGTC
>probe:Drosophila_2:1627420_s_at:610:203; Interrogation_Position=2346; Antisense; AAGCCATCGATGTTTGTGTATTGTA

Paste this into a BLAST search page for me
TCACCGCCATTATAGCCAGCATTGTAGCATTGTCCTGGTAATTGGTCTGGAATTGGTCTGGTCATCGGATTCGTCGCAGCGATTACGGAGTACAACCCATGGGCAGCAATCTGTCGCAGTTCTCGCTCGGTGGCCAGCAAGTTCAATAATGCTGCCAATGCCTAACACGGTGTTAGGTTCAAATTCCGAGCTAGCTGCACGCTAGCTGCACAAGTTTCGAGCCAAACCGAAAGACTTCCTGTGCGTGCTAGTGCGTGCTATCCTGTACATATGTATAGGTGCTCCCTGTATTAATTTCCAAAAGGAGCTGATCCCATTGCCAGTCAAGCCATCGATGTTTGTGTATTGTA

Full Affymetrix probeset data:

Annotations for 1627420_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720