FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1627454_a_at:

>probe:Drosophila_2:1627454_a_at:165:135; Interrogation_Position=2328; Antisense; ACGCGATGGCATTGTGGAGACCCGA
>probe:Drosophila_2:1627454_a_at:295:375; Interrogation_Position=2361; Antisense; GAAGATAACCATTCAGTCCGATGGA
>probe:Drosophila_2:1627454_a_at:398:503; Interrogation_Position=2376; Antisense; GTCCGATGGAGATCCGATCGATCAT
>probe:Drosophila_2:1627454_a_at:613:449; Interrogation_Position=2391; Antisense; GATCGATCATGACAAAGCCTTGGCC
>probe:Drosophila_2:1627454_a_at:212:205; Interrogation_Position=2405; Antisense; AAGCCTTGGCCGAGGCAATACAAGA
>probe:Drosophila_2:1627454_a_at:284:371; Interrogation_Position=2428; Antisense; GAAGCGACGGCCATGAATCCGGACA
>probe:Drosophila_2:1627454_a_at:531:367; Interrogation_Position=2442; Antisense; GAATCCGGACATGACAGTCGAGAAG
>probe:Drosophila_2:1627454_a_at:221:173; Interrogation_Position=2511; Antisense; AAACCATTCGGATGATTTTCTAAGT
>probe:Drosophila_2:1627454_a_at:557:699; Interrogation_Position=2526; Antisense; TTTTCTAAGTAAACCCGCACACACA
>probe:Drosophila_2:1627454_a_at:30:265; Interrogation_Position=2583; Antisense; CAGCACTTGCAGTACACCTTTTATA
>probe:Drosophila_2:1627454_a_at:579:725; Interrogation_Position=2667; Antisense; TTGAGCTCGAGCTGATGACCCACAT
>probe:Drosophila_2:1627454_a_at:309:445; Interrogation_Position=2680; Antisense; GATGACCCACATGACATAACACTAA
>probe:Drosophila_2:1627454_a_at:494:705; Interrogation_Position=2737; Antisense; TTACCGCAACCGTCTACGAGAAAAT
>probe:Drosophila_2:1627454_a_at:459:19; Interrogation_Position=2868; Antisense; ATATTGTAAACCACGATTGCATTCA

Paste this into a BLAST search page for me
ACGCGATGGCATTGTGGAGACCCGAGAAGATAACCATTCAGTCCGATGGAGTCCGATGGAGATCCGATCGATCATGATCGATCATGACAAAGCCTTGGCCAAGCCTTGGCCGAGGCAATACAAGAGAAGCGACGGCCATGAATCCGGACAGAATCCGGACATGACAGTCGAGAAGAAACCATTCGGATGATTTTCTAAGTTTTTCTAAGTAAACCCGCACACACACAGCACTTGCAGTACACCTTTTATATTGAGCTCGAGCTGATGACCCACATGATGACCCACATGACATAACACTAATTACCGCAACCGTCTACGAGAAAATATATTGTAAACCACGATTGCATTCA

Full Affymetrix probeset data:

Annotations for 1627454_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720