FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1627509_s_at:

>probe:Drosophila_2:1627509_s_at:283:41; Interrogation_Position=2593; Antisense; ATCGGAGCCTCTGCCAATGTGGTTT
>probe:Drosophila_2:1627509_s_at:303:583; Interrogation_Position=2627; Antisense; TGGCGGAGCAGCACGGCTACAAGTT
>probe:Drosophila_2:1627509_s_at:334:665; Interrogation_Position=2644; Antisense; TACAAGTTCACCTTCCTGCAGTTCT
>probe:Drosophila_2:1627509_s_at:711:463; Interrogation_Position=2674; Antisense; GTTGGATTTCCCATCATGATCGGCA
>probe:Drosophila_2:1627509_s_at:359:605; Interrogation_Position=2690; Antisense; TGATCGGCAGCATCATTGTCACCAC
>probe:Drosophila_2:1627509_s_at:237:139; Interrogation_Position=2713; Antisense; ACGGGCTATCTGCTCGTTTCGCATT
>probe:Drosophila_2:1627509_s_at:464:635; Interrogation_Position=2737; Antisense; TCGCTGTTCGCGTGGCATTGATGAA
>probe:Drosophila_2:1627509_s_at:609:427; Interrogation_Position=2780; Antisense; GAGTTGACTGTGTCGATTCGCAACA
>probe:Drosophila_2:1627509_s_at:522:181; Interrogation_Position=2801; Antisense; AACAAGGCGCACTGTACCTCGTTAC
>probe:Drosophila_2:1627509_s_at:272:399; Interrogation_Position=2832; Antisense; GACAGAAACTGTTCCGGATGCCACA
>probe:Drosophila_2:1627509_s_at:657:47; Interrogation_Position=2849; Antisense; ATGCCACAGACATCCGGTTTCCGAT
>probe:Drosophila_2:1627509_s_at:454:439; Interrogation_Position=2895; Antisense; GATGGGAATCAACTCCTTATGCGAT
>probe:Drosophila_2:1627509_s_at:234:729; Interrogation_Position=2919; Antisense; TTGTCATAAGTGTTGGTTCCGGGTA
>probe:Drosophila_2:1627509_s_at:314:655; Interrogation_Position=3089; Antisense; TAATACTGTCGCTGAACTGTGAAAC

Paste this into a BLAST search page for me
ATCGGAGCCTCTGCCAATGTGGTTTTGGCGGAGCAGCACGGCTACAAGTTTACAAGTTCACCTTCCTGCAGTTCTGTTGGATTTCCCATCATGATCGGCATGATCGGCAGCATCATTGTCACCACACGGGCTATCTGCTCGTTTCGCATTTCGCTGTTCGCGTGGCATTGATGAAGAGTTGACTGTGTCGATTCGCAACAAACAAGGCGCACTGTACCTCGTTACGACAGAAACTGTTCCGGATGCCACAATGCCACAGACATCCGGTTTCCGATGATGGGAATCAACTCCTTATGCGATTTGTCATAAGTGTTGGTTCCGGGTATAATACTGTCGCTGAACTGTGAAAC

Full Affymetrix probeset data:

Annotations for 1627509_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720