FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1627564_s_at:

>probe:Drosophila_2:1627564_s_at:156:245; Interrogation_Position=3697; Antisense; AATTTGCACGAGAAGAACCGCCAGC
>probe:Drosophila_2:1627564_s_at:348:185; Interrogation_Position=3722; Antisense; AACAGAACTTCAGCTACACCGGCAT
>probe:Drosophila_2:1627564_s_at:61:273; Interrogation_Position=3748; Antisense; CTTGACTCGATACCCGTACGCTATG
>probe:Drosophila_2:1627564_s_at:105:683; Interrogation_Position=3769; Antisense; TATGCCCAAATCCAGAGCTTCTACG
>probe:Drosophila_2:1627564_s_at:161:575; Interrogation_Position=3858; Antisense; GGCGGCAAAGGCAACTGCAGACCAA
>probe:Drosophila_2:1627564_s_at:90:185; Interrogation_Position=3898; Antisense; AAAAGGGTGCGAGCGTGTTCTCTCT
>probe:Drosophila_2:1627564_s_at:39:515; Interrogation_Position=3912; Antisense; GTGTTCTCTCTGTACAACCACAAAT
>probe:Drosophila_2:1627564_s_at:302:565; Interrogation_Position=3976; Antisense; GGCAAAACCAAACCAGCAATCGCTG
>probe:Drosophila_2:1627564_s_at:392:45; Interrogation_Position=3994; Antisense; ATCGCTGCTGCAGCTTCGGTTGTGG
>probe:Drosophila_2:1627564_s_at:530:389; Interrogation_Position=4049; Antisense; GAAACTGTTACCATCAGCCGGAGCA
>probe:Drosophila_2:1627564_s_at:276:363; Interrogation_Position=4112; Antisense; GAATTTGCTTGTTGTGTTTAGACCA
>probe:Drosophila_2:1627564_s_at:418:473; Interrogation_Position=4164; Antisense; GTTCACTTTCAACTCGATGGCTACA
>probe:Drosophila_2:1627564_s_at:509:67; Interrogation_Position=4180; Antisense; ATGGCTACAATGATGACGACCTCCC
>probe:Drosophila_2:1627564_s_at:489:409; Interrogation_Position=4194; Antisense; GACGACCTCCCAGCAAATGTTAAGT

Paste this into a BLAST search page for me
AATTTGCACGAGAAGAACCGCCAGCAACAGAACTTCAGCTACACCGGCATCTTGACTCGATACCCGTACGCTATGTATGCCCAAATCCAGAGCTTCTACGGGCGGCAAAGGCAACTGCAGACCAAAAAAGGGTGCGAGCGTGTTCTCTCTGTGTTCTCTCTGTACAACCACAAATGGCAAAACCAAACCAGCAATCGCTGATCGCTGCTGCAGCTTCGGTTGTGGGAAACTGTTACCATCAGCCGGAGCAGAATTTGCTTGTTGTGTTTAGACCAGTTCACTTTCAACTCGATGGCTACAATGGCTACAATGATGACGACCTCCCGACGACCTCCCAGCAAATGTTAAGT

Full Affymetrix probeset data:

Annotations for 1627564_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720