FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1627589_s_at:

>probe:Drosophila_2:1627589_s_at:589:51; Interrogation_Position=1629; Antisense; ATGCGTTGCCGAATAAGCTAGCCGT
>probe:Drosophila_2:1627589_s_at:721:593; Interrogation_Position=1653; Antisense; TGGGCGAACTGATGCCGGAGATCAA
>probe:Drosophila_2:1627589_s_at:572:97; Interrogation_Position=1718; Antisense; AGATCCGCCGAGACAAAGACGCAAT
>probe:Drosophila_2:1627589_s_at:653:155; Interrogation_Position=1752; Antisense; ACACGGGTAGACACCTAATGTACAT
>probe:Drosophila_2:1627589_s_at:490:445; Interrogation_Position=1820; Antisense; GATGAATCGCTACAAGCTATCCTAG
>probe:Drosophila_2:1627589_s_at:499:47; Interrogation_Position=1847; Antisense; ATGCCATTACCACTTCCATAAAACA
>probe:Drosophila_2:1627589_s_at:507:189; Interrogation_Position=1871; Antisense; AACTTTATGTCCTCGGTCCATTTCT
>probe:Drosophila_2:1627589_s_at:713:501; Interrogation_Position=1886; Antisense; GTCCATTTCTTCACATCCCGAAAAG
>probe:Drosophila_2:1627589_s_at:591:223; Interrogation_Position=1908; Antisense; AAGGTTTCGTTTGGGCTCCACTGCG
>probe:Drosophila_2:1627589_s_at:139:419; Interrogation_Position=1933; Antisense; GAGCTCTTCCCTTTTGTACAAATAC
>probe:Drosophila_2:1627589_s_at:662:81; Interrogation_Position=2037; Antisense; AGGGCGCATTTACTATTGAATTCTG
>probe:Drosophila_2:1627589_s_at:522:613; Interrogation_Position=2053; Antisense; TGAATTCTGGTTTTCCGTCACTAAG
>probe:Drosophila_2:1627589_s_at:540:291; Interrogation_Position=2068; Antisense; CGTCACTAAGTTGGCCATTACGTGT
>probe:Drosophila_2:1627589_s_at:586:57; Interrogation_Position=2095; Antisense; ATGAGTCGCCTAAGTAAATCCTATA

Paste this into a BLAST search page for me
ATGCGTTGCCGAATAAGCTAGCCGTTGGGCGAACTGATGCCGGAGATCAAAGATCCGCCGAGACAAAGACGCAATACACGGGTAGACACCTAATGTACATGATGAATCGCTACAAGCTATCCTAGATGCCATTACCACTTCCATAAAACAAACTTTATGTCCTCGGTCCATTTCTGTCCATTTCTTCACATCCCGAAAAGAAGGTTTCGTTTGGGCTCCACTGCGGAGCTCTTCCCTTTTGTACAAATACAGGGCGCATTTACTATTGAATTCTGTGAATTCTGGTTTTCCGTCACTAAGCGTCACTAAGTTGGCCATTACGTGTATGAGTCGCCTAAGTAAATCCTATA

Full Affymetrix probeset data:

Annotations for 1627589_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720