FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1627612_a_at:

>probe:Drosophila_2:1627612_a_at:468:419; Interrogation_Position=5609; Antisense; GAGCAGCTTCAAGCGATGCCGAAGT
>probe:Drosophila_2:1627612_a_at:446:51; Interrogation_Position=5640; Antisense; ATGAGTGGAGCAGCCGAAGCCTAAA
>probe:Drosophila_2:1627612_a_at:303:479; Interrogation_Position=5713; Antisense; GTTTGACGACAACGAAACGCTTATC
>probe:Drosophila_2:1627612_a_at:597:391; Interrogation_Position=5726; Antisense; GAAACGCTTATCACACACCTTAGGC
>probe:Drosophila_2:1627612_a_at:135:35; Interrogation_Position=5735; Antisense; ATCACACACCTTAGGCTGGGTCGAT
>probe:Drosophila_2:1627612_a_at:36:35; Interrogation_Position=5799; Antisense; ATCAGAGCTCTTATTTACGTTACGG
>probe:Drosophila_2:1627612_a_at:71:373; Interrogation_Position=5834; Antisense; GACGGTATTTTGGAACTATTCCTAG
>probe:Drosophila_2:1627612_a_at:190:463; Interrogation_Position=5906; Antisense; GATTCGAAGTGTTCTTAGGTTTTCA
>probe:Drosophila_2:1627612_a_at:182:697; Interrogation_Position=5941; Antisense; TTTTTCCCAAGCGAGGAAGCCTTCT
>probe:Drosophila_2:1627612_a_at:77:123; Interrogation_Position=5958; Antisense; AGCCTTCTGGGCAAACTTCTTTAGA
>probe:Drosophila_2:1627612_a_at:420:5; Interrogation_Position=5983; Antisense; ATTGTCCTCAATTTACTTGTACTTG
>probe:Drosophila_2:1627612_a_at:234:511; Interrogation_Position=6051; Antisense; GTGAAAGCCCCAACTTGACATGTGT
>probe:Drosophila_2:1627612_a_at:608:149; Interrogation_Position=6063; Antisense; ACTTGACATGTGTTGCATTGTGAAA
>probe:Drosophila_2:1627612_a_at:698:651; Interrogation_Position=6127; Antisense; TAAGTACTTAACGATTTTTCGCTGT

Paste this into a BLAST search page for me
GAGCAGCTTCAAGCGATGCCGAAGTATGAGTGGAGCAGCCGAAGCCTAAAGTTTGACGACAACGAAACGCTTATCGAAACGCTTATCACACACCTTAGGCATCACACACCTTAGGCTGGGTCGATATCAGAGCTCTTATTTACGTTACGGGACGGTATTTTGGAACTATTCCTAGGATTCGAAGTGTTCTTAGGTTTTCATTTTTCCCAAGCGAGGAAGCCTTCTAGCCTTCTGGGCAAACTTCTTTAGAATTGTCCTCAATTTACTTGTACTTGGTGAAAGCCCCAACTTGACATGTGTACTTGACATGTGTTGCATTGTGAAATAAGTACTTAACGATTTTTCGCTGT

Full Affymetrix probeset data:

Annotations for 1627612_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720