FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1627644_a_at:

>probe:Drosophila_2:1627644_a_at:522:515; Interrogation_Position=2203; Antisense; GTGTACTTCAATCGCACATCGTCGT
>probe:Drosophila_2:1627644_a_at:722:315; Interrogation_Position=2234; Antisense; GCCTCGAAGATCTGCAGCCTGACAA
>probe:Drosophila_2:1627644_a_at:52:231; Interrogation_Position=2257; Antisense; AATGACGATAGCTCTGGCCGGGATT
>probe:Drosophila_2:1627644_a_at:286:373; Interrogation_Position=2284; Antisense; GAAGTGGCTGGGACACCGCTGAATA
>probe:Drosophila_2:1627644_a_at:628:239; Interrogation_Position=2305; Antisense; AATACTTCGGTGGATGAGTTCGGAC
>probe:Drosophila_2:1627644_a_at:582:353; Interrogation_Position=2357; Antisense; GCACCTTCAGCGTGATCTATGACTG
>probe:Drosophila_2:1627644_a_at:290:33; Interrogation_Position=2383; Antisense; ATCAGCGGATTTTTCAACTCCTGCG
>probe:Drosophila_2:1627644_a_at:201:727; Interrogation_Position=2422; Antisense; TTGGAGGCCTTCCAGAAGCAGACCT
>probe:Drosophila_2:1627644_a_at:643:349; Interrogation_Position=2439; Antisense; GCAGACCTGCTGTGAAACCTACGTG
>probe:Drosophila_2:1627644_a_at:319:191; Interrogation_Position=2454; Antisense; AACCTACGTGGTTGATCCCTCGTAT
>probe:Drosophila_2:1627644_a_at:576:155; Interrogation_Position=2517; Antisense; ACAGACTTGCTGTGCACCGGTGAGA
>probe:Drosophila_2:1627644_a_at:703:283; Interrogation_Position=2712; Antisense; CTGTGGGCGGCTCTACAACAACAGC
>probe:Drosophila_2:1627644_a_at:364:109; Interrogation_Position=2756; Antisense; AGAAGGTCACCATCTATGTGCCACC
>probe:Drosophila_2:1627644_a_at:627:311; Interrogation_Position=2775; Antisense; GCCACCACCCTATTATGGGCGGTAA

Paste this into a BLAST search page for me
GTGTACTTCAATCGCACATCGTCGTGCCTCGAAGATCTGCAGCCTGACAAAATGACGATAGCTCTGGCCGGGATTGAAGTGGCTGGGACACCGCTGAATAAATACTTCGGTGGATGAGTTCGGACGCACCTTCAGCGTGATCTATGACTGATCAGCGGATTTTTCAACTCCTGCGTTGGAGGCCTTCCAGAAGCAGACCTGCAGACCTGCTGTGAAACCTACGTGAACCTACGTGGTTGATCCCTCGTATACAGACTTGCTGTGCACCGGTGAGACTGTGGGCGGCTCTACAACAACAGCAGAAGGTCACCATCTATGTGCCACCGCCACCACCCTATTATGGGCGGTAA

Full Affymetrix probeset data:

Annotations for 1627644_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720