FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1627664_a_at:

>probe:Drosophila_2:1627664_a_at:176:21; Interrogation_Position=2742; Antisense; ATATTGTCTCAGTCTCAATGTTGAA
>probe:Drosophila_2:1627664_a_at:165:487; Interrogation_Position=2823; Antisense; GTAGTTGGTTGACTTGTGGTACACA
>probe:Drosophila_2:1627664_a_at:80:203; Interrogation_Position=2850; Antisense; AACCTAGGATTTATGATCGAGCGAC
>probe:Drosophila_2:1627664_a_at:367:451; Interrogation_Position=2864; Antisense; GATCGAGCGACAATATACTATGAGA
>probe:Drosophila_2:1627664_a_at:99:231; Interrogation_Position=3021; Antisense; AATGCAAACGTTTCCCTGCAACTTT
>probe:Drosophila_2:1627664_a_at:704:695; Interrogation_Position=3031; Antisense; TTTCCCTGCAACTTTTTTGTGGCAC
>probe:Drosophila_2:1627664_a_at:20:729; Interrogation_Position=3047; Antisense; TTGTGGCACAAGTCAATCGCACGCT
>probe:Drosophila_2:1627664_a_at:116:237; Interrogation_Position=3061; Antisense; AATCGCACGCTAAACTACACAAAAT
>probe:Drosophila_2:1627664_a_at:332:449; Interrogation_Position=3118; Antisense; GATACCTACGCTTAAGTTACCCTTG
>probe:Drosophila_2:1627664_a_at:551:481; Interrogation_Position=3145; Antisense; GTATTTACCCACCACTCAGTGTATA
>probe:Drosophila_2:1627664_a_at:158:511; Interrogation_Position=3184; Antisense; TGTAAAGCTAAACCGTTCCAAGTGC
>probe:Drosophila_2:1627664_a_at:619:469; Interrogation_Position=3198; Antisense; GTTCCAAGTGCAATTTGTAATCCCA
>probe:Drosophila_2:1627664_a_at:183:551; Interrogation_Position=3234; Antisense; GGAGATCCGTAATGAAATCCGTAAT
>probe:Drosophila_2:1627664_a_at:333:45; Interrogation_Position=3250; Antisense; ATCCGTAATACGTGTGGCAATAAAG

Paste this into a BLAST search page for me
ATATTGTCTCAGTCTCAATGTTGAAGTAGTTGGTTGACTTGTGGTACACAAACCTAGGATTTATGATCGAGCGACGATCGAGCGACAATATACTATGAGAAATGCAAACGTTTCCCTGCAACTTTTTTCCCTGCAACTTTTTTGTGGCACTTGTGGCACAAGTCAATCGCACGCTAATCGCACGCTAAACTACACAAAATGATACCTACGCTTAAGTTACCCTTGGTATTTACCCACCACTCAGTGTATATGTAAAGCTAAACCGTTCCAAGTGCGTTCCAAGTGCAATTTGTAATCCCAGGAGATCCGTAATGAAATCCGTAATATCCGTAATACGTGTGGCAATAAAG

Full Affymetrix probeset data:

Annotations for 1627664_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720